Cow genome map
| Conread name: | rhlv23b_j22.y1 |
| Conread position: | 339-506 |
| Cow position: | chr3:73460888-73461055 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 115 |
| Conread position: | 339-586 |
| Cow position: | chr3:53221938-53222185 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 340-586 |
| Cow position: | chr3:39969940-39969690 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 341-492 |
| Cow position: | chr3:80072054-80072204 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 341-579 |
| Cow position: | chr3:30180009-30180249 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 147 |
| Conread position: | 341-582 |
| Cow position: | chr3:65969089-65969343 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 341-583 |
| Cow position: | chr3:14546928-14547169 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 21 |
| Conread position: | 341-583 |
| Cow position: | chr3:15052024-15051782 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 341-583 |
| Cow position: | chr3:22221247-22221496 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 341-583 |
| Cow position: | chr3:55318975-55318728 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 341-584 |
| Cow position: | chr3:76268051-76267804 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 243 |
| Conread position: | 341-586 |
| Cow position: | chr3:2393035-2392796 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 341-586 |
| Cow position: | chr3:48363004-48363242 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 153, 7 |
| Conread position: | 341-586 |
| Cow position: | chr3:48459405-48459156 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 341-586 |
| Cow position: | chr3:59604772-59605015 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 158, 7 |
| Conread position: | 341-586 |
| Cow position: | chr3:64281004-64280765 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 343-561 |
| Cow position: | chr3:74134629-74134855 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 200 |
| Conread position: | 343-583 |
| Cow position: | chr3:74533277-74533504 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 346-462 |
| Cow position: | chr3:19162543-19162656 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 346-477 |
| Cow position: | chr3:59799179-59799308 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 346-492 |
| Cow position: | chr3:26874524-26874665 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 63 |
| Conread position: | 346-496 |
| Cow position: | chr3:478869-478721 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 346-519 |
| Cow position: | chr3:15506377-15506554 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 346-520 |
| Cow position: | chr3:13507396-13507574 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 346-520 |
| Cow position: | chr3:56059739-56059917 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 346-524 |
| Cow position: | chr3:62789248-62789064 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 346-548 |
| Cow position: | chr3:70565806-70565599 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 346-574 |
| Cow position: | chr3:18607593-18607824 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 346-575 |
| Cow position: | chr3:29891480-29891244 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 346-576 |
| Cow position: | chr3:74079707-74079475 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 346-580 |
| Cow position: | chr3:13353293-13353531 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 133, 85 |
| Conread position: | 346-580 |
| Cow position: | chr3:23169135-23168901 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 346-580 |
| Cow position: | chr3:64196755-64196992 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 346-580 |
| Cow position: | chr3:76922731-76922506 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 346-581 |
| Cow position: | chr3:59299507-59299741 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 16 |
| Conread position: | 346-583 |
| Cow position: | chr3:10668948-10668709 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 133, 23 |
| Conread position: | 346-583 |
| Cow position: | chr3:17331658-17331889 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 346-583 |
| Cow position: | chr3:31361349-31361593 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 346-583 |
| Cow position: | chr3:59610790-59610549 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 188 |
| Conread position: | 346-583 |
| Cow position: | chr3:75479932-75480168 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 155, 85 |
| Conread position: | 346-583 |
| Cow position: | chr3:75608428-75608658 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 346-586 |
| Cow position: | chr3:4461560-4461317 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 153 |
| Conread position: | 346-586 |
| Cow position: | chr3:10958311-10958071 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 148, 210 |
| Conread position: | 346-586 |
| Cow position: | chr3:12705614-12705374 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 164, 135 |
| Conread position: | 346-586 |
| Cow position: | chr3:17936910-17936674 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 346-586 |
| Cow position: | chr3:22232721-22232495 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 346-586 |
| Cow position: | chr3:44932444-44932685 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 346-586 |
| Cow position: | chr3:49327873-49328107 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 221, 148 |
| Conread position: | 346-586 |
| Cow position: | chr3:53790605-53790369 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 346-586 |
| Cow position: | chr3:55177819-55177578 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 150 |
| Conread position: | 346-586 |
| Cow position: | chr3:61224816-61224576 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 346-586 |
| Cow position: | chr3:71474477-71474234 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 346-586 |
| Cow position: | chr3:74754254-74754488 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 346-586 |
| Cow position: | chr3:79196688-79196936 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 347-515 |
| Cow position: | chr3:55272114-55271948 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 347-546 |
| Cow position: | chr3:19626577-19626374 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 12, 150 |
| Conread position: | 347-573 |
| Cow position: | chr3:16752328-16752094 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 147, 86 |
| Conread position: | 347-580 |
| Cow position: | chr3:70762191-70761956 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 347-583 |
| Cow position: | chr3:19585794-19586034 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 144, 85 |
| Conread position: | 347-583 |
| Cow position: | chr3:76155919-76156156 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 348-549 |
| Cow position: | chr3:15751781-15751578 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 48 |
| Conread position: | 348-563 |
| Cow position: | chr3:52608113-52608331 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 348-580 |
| Cow position: | chr3:38864055-38864285 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 176 |
| Conread position: | 348-583 |
| Cow position: | chr3:59933302-59933550 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 348-586 |
| Cow position: | chr3:4548957-4549190 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 200 |
| Conread position: | 348-586 |
| Cow position: | chr3:33002324-33002558 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 348-586 |
| Cow position: | chr3:54506637-54506879 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 348-586 |
| Cow position: | chr3:55189823-55189577 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 348-586 |
| Cow position: | chr3:68616393-68616162 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 348-586 |
| Cow position: | chr3:68708077-68707849 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 138, 71 |
| Conread position: | 349-586 |
| Cow position: | chr3:27274463-27274700 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 95 |
| Conread position: | 350-583 |
| Cow position: | chr3:78092579-78092341 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 350-583 |
| Cow position: | chr3:81234323-81234558 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 149, 17 |
| Conread position: | 351-579 |
| Cow position: | chr3:70609566-70609791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 351-580 |
| Cow position: | chr3:19682628-19682873 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 351-583 |
| Cow position: | chr3:22165482-22165245 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 352-576 |
| Cow position: | chr3:31350169-31349945 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 159, 142 |
| Conread position: | 352-583 |
| Cow position: | chr3:7337847-7337617 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 141, 97 |
| Conread position: | 352-586 |
| Cow position: | chr3:9641501-9641728 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 352-586 |
| Cow position: | chr3:82019904-82019669 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 142, 172 |
| Conread position: | 353-586 |
| Cow position: | chr3:54373923-54373684 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 27, 14 |
| Conread position: | 354-519 |
| Cow position: | chr3:3738421-3738586 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 18 |
| Conread position: | 354-583 |
| Cow position: | chr3:1036959-1037198 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 354-586 |
| Cow position: | chr3:70334029-70333796 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 355-580 |
| Cow position: | chr3:45881838-45882066 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 139, 12 |
| Conread position: | 355-583 |
| Cow position: | chr3:18686843-18687071 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 151 |
| Conread position: | 356-495 |
| Cow position: | chr3:63177422-63177561 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 356-579 |
| Cow position: | chr3:83455208-83454991 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 356-586 |
| Cow position: | chr3:71703417-71703631 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 356-586 |
| Cow position: | chr3:76269833-76270061 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 154, 28 |
| Conread position: | 357-517 |
| Cow position: | chr3:32409152-32409312 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 357-583 |
| Cow position: | chr3:3883875-3883650 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 357-583 |
| Cow position: | chr3:70895984-70896209 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 357-586 |
| Cow position: | chr3:23408416-23408191 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 357-586 |
| Cow position: | chr3:49363049-49363280 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 357-586 |
| Cow position: | chr3:68004763-68004535 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 160 |
| Conread position: | 357-586 |
| Cow position: | chr3:68881176-68880958 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 357-586 |
| Cow position: | chr3:69785685-69785447 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 358-477 |
| Cow position: | chr3:75711247-75711366 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-583 |
| Cow position: | chr3:15950973-15950747 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 166 |
| Conread position: | 358-583 |
| Cow position: | chr3:53428974-53428748 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 358-586 |
| Cow position: | chr3:49344634-49344865 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 359-574 |
| Cow position: | chr3:60264775-60264561 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 8, 132 |
| Conread position: | 359-582 |
| Cow position: | chr3:48072940-48072717 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 142, 200 |
| Conread position: | 359-586 |
| Cow position: | chr3:78093448-78093220 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 359-586 |
| Cow position: | chr3:79272632-79272403 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 362-520 |
| Cow position: | chr3:82629261-82629423 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 362-583 |
| Cow position: | chr3:8349620-8349401 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 186 |
| Conread position: | 363-583 |
| Cow position: | chr3:53150271-53150503 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 168 |
| Conread position: | 363-586 |
| Cow position: | chr3:6182276-6182059 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 363-586 |
| Cow position: | chr3:75080709-75080925 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 131, 100 |
| Conread position: | 364-492 |
| Cow position: | chr3:58968956-58968828 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-583 |
| Cow position: | chr3:78077133-78077360 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 366-586 |
| Cow position: | chr3:44961055-44960845 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 368-583 |
| Cow position: | chr3:52845501-52845725 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 369-586 |
| Cow position: | chr3:23132217-23131995 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 369-586 |
| Cow position: | chr3:75107726-75107945 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 370-520 |
| Cow position: | chr3:38100094-38100245 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 137 |
| Conread position: | 370-574 |
| Cow position: | chr3:53084036-53083822 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 370-579 |
| Cow position: | chr3:26603602-26603380 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 370-586 |
| Cow position: | chr3:50768631-50768852 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 8, 135 |
| Conread position: | 375-492 |
| Cow position: | chr3:41652334-41652451 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-583 |
| Cow position: | chr3:73395075-73395285 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 29 |
| Conread position: | 375-586 |
| Cow position: | chr3:7331165-7330965 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 378-583 |
| Cow position: | chr3:68156683-68156897 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 67, 160 |
| Conread position: | 382-583 |
| Cow position: | chr3:17058581-17058377 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 383-577 |
| Cow position: | chr3:22924409-22924216 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 386-553 |
| Cow position: | chr3:73421524-73421352 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 386-567 |
| Cow position: | chr3:35238982-35239165 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 87 |
| Conread position: | 386-580 |
| Cow position: | chr3:20021238-20021435 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 392-586 |
| Cow position: | chr3:67407391-67407194 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 393-559 |
| Cow position: | chr3:19788854-19788685 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 396-586 |
| Cow position: | chr3:8523171-8522981 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 396-586 |
| Cow position: | chr3:31115291-31115105 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 396-586 |
| Cow position: | chr3:75966802-75966609 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 401-586 |
| Cow position: | chr3:25038008-25037820 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 121, 177 |
| Conread position: | 408-586 |
| Cow position: | chr3:22868729-22868543 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 411-583 |
| Cow position: | chr3:70333227-70333059 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 416-573 |
| Cow position: | chr3:17531739-17531576 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 420-586 |
| Cow position: | chr3:43896057-43895890 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 421-586 |
| Cow position: | chr3:74050698-74050533 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 73 |
Show alignments to all cow chromosomes.