Cow genome map


           Conread name:
           rhlv23b_j22.y1
        

               Conread position:
               335-579
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               6, 160
               

               Conread position:
               338-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               161, 85
               

               Conread position:
               339-563
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               339-578
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               26, 183
               

               Conread position:
               339-583
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 93
               

               Conread position:
               340-492
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               340-506
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               340-580
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 27
               

               Conread position:
               341-520
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               341-520
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               341-572
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               210, 138
               

               Conread position:
               341-580
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               341-581
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               169, 22
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               343-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               151, 90
               

               Conread position:
               346-492
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               346-492
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               346-492
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               346-513
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               346-519
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               346-522
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               346-574
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               146, 9
               

               Conread position:
               346-576
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               153, 178
               

               Conread position:
               346-578
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               148, 85
               

               Conread position:
               346-578
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               346-580
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               346-582
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               163, 21
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               346-585
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 102
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               153, 198
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               21, 150
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               31, 187
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               153, 218
               

               Conread position:
               346-586
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               347-580
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               147, 16
               

               Conread position:
               347-580
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               347-586
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               152, 18
               

               Conread position:
               347-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               149, 230
               

               Conread position:
               348-491
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               348-576
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               348-584
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               16, 225
               

               Conread position:
               348-586
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               349-559
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               349-586
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               350-579
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               140, 64
               

               Conread position:
               350-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 198
               

               Conread position:
               351-501
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               147, 10
               

               Conread position:
               353-579
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               117, 66
               

               Conread position:
               354-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               355-507
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               355-519
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 14
               

               Conread position:
               355-520
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 12
               

               Conread position:
               355-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               137, 163
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               167, 17
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               356-585
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               357-583
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               357-586
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               357-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               145, 10
               

               Conread position:
               358-492
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               87, 125
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               168, 14
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               138, 164
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               134, 57
               

               Conread position:
               358-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 204
               

               Conread position:
               359-586
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               135, 187
               

               Conread position:
               360-492
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               362-583
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               362-586
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               363-576
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               138, 179
               

               Conread position:
               363-586
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 160
               

               Conread position:
               364-580
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               364-580
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               366-586
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               126, 121
               

               Conread position:
               369-495
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               369-581
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               122, 135
               

               Conread position:
               375-583
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               375-583
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               110, 102
               

               Conread position:
               375-586
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               116, 75
               

               Conread position:
               375-586
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               378-577
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               378-586
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               381-583
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 34
               

               Conread position:
               391-583
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               393-583
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 39
               

               Conread position:
               395-586
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               398-583
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               405-583
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               89, 154
               

               Conread position:
               419-586
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               420-576
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.