Cow genome map
| Conread name: | rhlv25b_g20.y1 |
| Conread position: | 61-239 |
| Cow position: | chr10:9675252-9675426 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 26 |
| Conread position: | 77-234 |
| Cow position: | chr10:11112831-11112667 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 78-227 |
| Cow position: | chr10:26607410-26607566 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 83-238 |
| Cow position: | chr10:32440406-32440238 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 84-239 |
| Cow position: | chr10:1996470-1996633 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 91-234 |
| Cow position: | chr10:55733415-55733565 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 97-237 |
| Cow position: | chr10:7383429-7383574 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 97-237 |
| Cow position: | chr10:37425949-37426094 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 97-239 |
| Cow position: | chr10:25822065-25822206 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 98-234 |
| Cow position: | chr10:1417781-1417637 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 100-239 |
| Cow position: | chr10:58043942-58044091 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 101-235 |
| Cow position: | chr10:10148835-10148690 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 101-237 |
| Cow position: | chr10:2613551-2613406 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 101-237 |
| Cow position: | chr10:13350022-13350170 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 101-239 |
| Cow position: | chr10:59572077-59571939 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 101-239 |
| Cow position: | chr10:65904425-65904281 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 102-239 |
| Cow position: | chr10:10634395-10634256 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 102-239 |
| Cow position: | chr10:48407318-48407175 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 109 |
| Conread position: | 102-239 |
| Cow position: | chr10:52695544-52695689 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 104-239 |
| Cow position: | chr10:3364003-3364145 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 107-237 |
| Cow position: | chr10:48130194-48130056 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 107-238 |
| Cow position: | chr10:59462306-59462171 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 107-239 |
| Cow position: | chr10:2857225-2857084 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 109-239 |
| Cow position: | chr10:6384702-6384568 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 113-239 |
| Cow position: | chr10:60236927-60237058 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 116-219 |
| Cow position: | chr10:10964686-10964583 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-231 |
| Cow position: | chr10:58451211-58451329 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 116-235 |
| Cow position: | chr10:14947423-14947296 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 116-237 |
| Cow position: | chr10:20553349-20553224 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 116-237 |
| Cow position: | chr10:25475702-25475572 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-237 |
| Cow position: | chr10:34661162-34661286 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 116-237 |
| Cow position: | chr10:37507982-37508110 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-237 |
| Cow position: | chr10:47429993-47429865 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-237 |
| Cow position: | chr10:59417068-59417196 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-238 |
| Cow position: | chr10:3276138-3276011 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-238 |
| Cow position: | chr10:3799913-3800034 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 116-238 |
| Cow position: | chr10:24448029-24447907 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-238 |
| Cow position: | chr10:24971161-24971288 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 116-238 |
| Cow position: | chr10:34654941-34655070 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:6242353-6242476 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-239 |
| Cow position: | chr10:7089510-7089384 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 116-239 |
| Cow position: | chr10:9575879-9576011 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:10104949-10104818 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:15817628-15817757 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:17150042-17149917 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 116-239 |
| Cow position: | chr10:20448087-20447958 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 116-239 |
| Cow position: | chr10:21348825-21348951 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 116-239 |
| Cow position: | chr10:24756578-24756449 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:26102981-26103100 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 116-239 |
| Cow position: | chr10:33694538-33694412 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 75 |
| Conread position: | 116-239 |
| Cow position: | chr10:34646286-34646409 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 116-239 |
| Cow position: | chr10:34903643-34903513 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:35731358-35731490 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:37415952-37415827 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 116-239 |
| Cow position: | chr10:37529104-37529228 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 116-239 |
| Cow position: | chr10:38205547-38205673 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 116-239 |
| Cow position: | chr10:40999027-40998895 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:41676245-41676372 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 27, 116 |
| Conread position: | 116-239 |
| Cow position: | chr10:43459884-43460015 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 116-239 |
| Cow position: | chr10:46327860-46327728 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:47785116-47785247 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 116-239 |
| Cow position: | chr10:49029818-49029689 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 116-239 |
| Cow position: | chr10:49862633-49862504 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:50558760-50558887 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:57095035-57095163 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 116-239 |
| Cow position: | chr10:57786506-57786376 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:60345752-60345871 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 116-239 |
| Cow position: | chr10:60697459-60697589 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr10:61509777-61509906 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 117-232 |
| Cow position: | chr10:10120356-10120238 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 117-234 |
| Cow position: | chr10:23346138-23346261 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 117-236 |
| Cow position: | chr10:31877808-31877929 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 117-238 |
| Cow position: | chr10:56828150-56828279 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 117-239 |
| Cow position: | chr10:52296665-52296532 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr10:58651024-58651152 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 117-239 |
| Cow position: | chr10:62353626-62353496 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 118-237 |
| Cow position: | chr10:18751308-18751436 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 118-239 |
| Cow position: | chr10:39124303-39124170 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 119-239 |
| Cow position: | chr10:54848944-54848815 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 122-239 |
| Cow position: | chr10:21422001-21422122 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 122-239 |
| Cow position: | chr10:22390760-22390634 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 122-239 |
| Cow position: | chr10:27178650-27178530 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 132-239 |
| Cow position: | chr10:52278875-52278762 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 139-239 |
| Cow position: | chr10:28395162-28395264 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.