Cow genome map
| Conread name: | rhlv25b_g20.y1 |
| Conread position: | 90-239 |
| Cow position: | chr19:52728820-52728662 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 92-236 |
| Cow position: | chr19:28447642-28447493 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 98-237 |
| Cow position: | chr19:21278667-21278522 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 101-235 |
| Cow position: | chr19:7668892-7668748 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 101-239 |
| Cow position: | chr19:3621627-3621480 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 131 |
| Conread position: | 101-239 |
| Cow position: | chr19:18054061-18054206 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 101-239 |
| Cow position: | chr19:33033245-33033389 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 101-239 |
| Cow position: | chr19:38500353-38500214 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 101-239 |
| Cow position: | chr19:41388959-41388812 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 101-239 |
| Cow position: | chr19:43413977-43413833 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 101-239 |
| Cow position: | chr19:44013784-44013650 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 102-234 |
| Cow position: | chr19:24145219-24145082 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 102-239 |
| Cow position: | chr19:13130061-13129920 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 102-239 |
| Cow position: | chr19:22871059-22871205 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 103-237 |
| Cow position: | chr19:44143751-44143882 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 103-238 |
| Cow position: | chr19:39751667-39751528 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 105-236 |
| Cow position: | chr19:24693199-24693061 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 107-239 |
| Cow position: | chr19:10930235-10930368 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 107-239 |
| Cow position: | chr19:11646756-11646617 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 109-230 |
| Cow position: | chr19:37646571-37646701 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 109-239 |
| Cow position: | chr19:24759697-24759834 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 109-239 |
| Cow position: | chr19:27968504-27968646 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 109-239 |
| Cow position: | chr19:47671924-47671794 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 61 |
| Conread position: | 114-239 |
| Cow position: | chr19:23088166-23088034 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 114-239 |
| Cow position: | chr19:52187669-52187536 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 116-220 |
| Cow position: | chr19:9708431-9708539 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-236 |
| Cow position: | chr19:17972086-17972210 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 6 |
| Conread position: | 116-236 |
| Cow position: | chr19:23378860-23378729 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 116-237 |
| Cow position: | chr19:14252026-14252150 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-237 |
| Cow position: | chr19:20517607-20517488 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 116-237 |
| Cow position: | chr19:43896484-43896360 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 116-237 |
| Cow position: | chr19:47184897-47185030 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 116-238 |
| Cow position: | chr19:7053163-7053290 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-238 |
| Cow position: | chr19:39576391-39576517 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 116-239 |
| Cow position: | chr19:4602513-4602645 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:6855100-6854968 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:7637052-7637185 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:10238919-10238787 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:12264139-12264013 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 116-239 |
| Cow position: | chr19:12686012-12685880 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:20694046-20693918 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:22414084-22414216 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:22765795-22765672 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 116-239 |
| Cow position: | chr19:23756568-23756692 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 116-239 |
| Cow position: | chr19:25832017-25832149 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:26057368-26057496 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:31268796-31268672 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 116-239 |
| Cow position: | chr19:31269018-31268894 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 116-239 |
| Cow position: | chr19:34420592-34420459 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:37466878-37467011 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:38732321-38732189 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:49221439-49221571 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr19:49409518-49409644 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 117-238 |
| Cow position: | chr19:19174696-19174569 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 117-238 |
| Cow position: | chr19:33903244-33903375 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr19:14631859-14631989 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr19:25572954-25572821 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 117-239 |
| Cow position: | chr19:28137329-28137204 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 117-239 |
| Cow position: | chr19:40126983-40127116 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 118-239 |
| Cow position: | chr19:15853107-15852977 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 119-238 |
| Cow position: | chr19:1968141-1968265 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 121-239 |
| Cow position: | chr19:35762077-35762199 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 122-239 |
| Cow position: | chr19:47453608-47453482 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 123-235 |
| Cow position: | chr19:13488330-13488446 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 124-239 |
| Cow position: | chr19:33988244-33988119 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 125-239 |
| Cow position: | chr19:25763279-25763161 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.