Cow genome map
| Conread name: | rhlv25b_g20.y1 |
| Conread position: | 60-238 |
| Cow position: | chr2:77467208-77467387 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 72-239 |
| Cow position: | chr2:51023967-51024138 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 8 |
| Conread position: | 77-239 |
| Cow position: | chr2:46312670-46312502 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 84-238 |
| Cow position: | chr2:19164741-19164904 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 85-239 |
| Cow position: | chr2:63568936-63568772 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 87-239 |
| Cow position: | chr2:11806794-11806631 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 93-236 |
| Cow position: | chr2:44051526-44051373 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 95-239 |
| Cow position: | chr2:46129948-46130098 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 97-238 |
| Cow position: | chr2:22371741-22371889 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 97-239 |
| Cow position: | chr2:53491247-53491389 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 101-235 |
| Cow position: | chr2:34810943-34811086 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 101-237 |
| Cow position: | chr2:1333519-1333381 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 101-237 |
| Cow position: | chr2:84480290-84480437 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 101-239 |
| Cow position: | chr2:44168271-44168127 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 101-239 |
| Cow position: | chr2:46239985-46240124 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 101-239 |
| Cow position: | chr2:61975548-61975408 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 87 |
| Conread position: | 101-239 |
| Cow position: | chr2:73981839-73981694 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 101-239 |
| Cow position: | chr2:75227414-75227265 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 102-239 |
| Cow position: | chr2:11657098-11656952 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 102-239 |
| Cow position: | chr2:38640527-38640385 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 102-239 |
| Cow position: | chr2:41452445-41452295 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 107-239 |
| Cow position: | chr2:6160146-6160281 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 89 |
| Conread position: | 107-239 |
| Cow position: | chr2:15872133-15871997 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 107-239 |
| Cow position: | chr2:40489006-40488868 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 107-239 |
| Cow position: | chr2:46351579-46351720 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 107-239 |
| Cow position: | chr2:81294033-81293889 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 109-239 |
| Cow position: | chr2:972019-971886 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 109-239 |
| Cow position: | chr2:17114540-17114668 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 109-239 |
| Cow position: | chr2:37009608-37009471 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 109-239 |
| Cow position: | chr2:40373205-40373339 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 111-239 |
| Cow position: | chr2:58969802-58969677 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 67 |
| Conread position: | 114-239 |
| Cow position: | chr2:65988289-65988160 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 116-237 |
| Cow position: | chr2:5604715-5604588 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 116-237 |
| Cow position: | chr2:45642298-45642423 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-237 |
| Cow position: | chr2:69003239-69003112 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-238 |
| Cow position: | chr2:57733622-57733497 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 116-239 |
| Cow position: | chr2:992347-992217 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:994177-994303 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:1205500-1205366 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:1888481-1888606 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 67 |
| Conread position: | 116-239 |
| Cow position: | chr2:18997911-18997781 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:19494409-19494276 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:21049140-21049268 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:28330556-28330685 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 116-239 |
| Cow position: | chr2:38913677-38913547 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:38965804-38965679 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 116-239 |
| Cow position: | chr2:39068474-39068347 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 116-239 |
| Cow position: | chr2:40257222-40257350 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:41248760-41248633 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 116-239 |
| Cow position: | chr2:41462230-41462362 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:43577584-43577716 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:43591179-43591311 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:43624345-43624471 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 116-239 |
| Cow position: | chr2:43995125-43994998 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:44065759-44065633 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 116-239 |
| Cow position: | chr2:46033529-46033397 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:46052695-46052561 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:46162147-46162019 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:46378597-46378731 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:46968003-46968130 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-239 |
| Cow position: | chr2:51277766-51277893 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:55112832-55112956 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 116-239 |
| Cow position: | chr2:58153898-58153766 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:77140387-77140518 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr2:80177403-80177529 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 116-239 |
| Cow position: | chr2:84750902-84750771 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 117-235 |
| Cow position: | chr2:10743381-10743497 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 21 |
| Conread position: | 117-239 |
| Cow position: | chr2:46120451-46120580 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 117-239 |
| Cow position: | chr2:47879429-47879303 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 118-239 |
| Cow position: | chr2:46245269-46245399 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 119-238 |
| Cow position: | chr2:75462514-75462391 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 119-239 |
| Cow position: | chr2:20947560-20947434 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 119-239 |
| Cow position: | chr2:31784120-31783991 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 119-239 |
| Cow position: | chr2:71437185-71437316 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 120-238 |
| Cow position: | chr2:46222818-46222936 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 122-234 |
| Cow position: | chr2:7453167-7453284 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 122-239 |
| Cow position: | chr2:45542213-45542337 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 122-239 |
| Cow position: | chr2:69350379-69350503 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 124-235 |
| Cow position: | chr2:45491028-45491148 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 124-239 |
| Cow position: | chr2:10440015-10439901 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 54 |
| Conread position: | 125-238 |
| Cow position: | chr2:56338850-56338968 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 80 |
Show alignments to all cow chromosomes.