Cow genome map
| Conread name: | rhlv25b_g20.y1 |
| Conread position: | 69-239 |
| Cow position: | chr25:35338951-35339130 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 74-239 |
| Cow position: | chr25:18866046-18865879 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 92-239 |
| Cow position: | chr25:36873124-36873274 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 97-239 |
| Cow position: | chr25:23998727-23998865 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 70 |
| Conread position: | 101-228 |
| Cow position: | chr25:14658918-14659050 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 101-239 |
| Cow position: | chr25:4521633-4521782 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 102-239 |
| Cow position: | chr25:22179116-22178975 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 103-239 |
| Cow position: | chr25:31657075-31657218 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 107-239 |
| Cow position: | chr25:14210177-14210042 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 112-239 |
| Cow position: | chr25:19363864-19364000 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 113-239 |
| Cow position: | chr25:22734201-22734066 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 116-229 |
| Cow position: | chr25:14419886-14419771 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 116-231 |
| Cow position: | chr25:24669260-24669382 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-232 |
| Cow position: | chr25:4245857-4245736 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-238 |
| Cow position: | chr25:7864523-7864393 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 116-239 |
| Cow position: | chr25:2362017-2361893 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 116-239 |
| Cow position: | chr25:2414989-2414856 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:4157055-4157187 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:4504588-4504715 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 116-239 |
| Cow position: | chr25:5637197-5637326 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:7750639-7750511 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:9025315-9025181 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 116-239 |
| Cow position: | chr25:9573943-9574075 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:13272761-13272628 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:13565142-13565265 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 116-239 |
| Cow position: | chr25:15349717-15349849 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:18288578-18288710 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:18934444-18934576 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:21082214-21082348 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:24115123-24115257 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:26679419-26679284 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:28667858-28667987 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 116-239 |
| Cow position: | chr25:33457917-33457791 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 116-239 |
| Cow position: | chr25:36082060-36081934 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 117-238 |
| Cow position: | chr25:21893525-21893398 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr25:1840512-1840383 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr25:7684708-7684842 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 117-239 |
| Cow position: | chr25:13223088-13222959 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 117-239 |
| Cow position: | chr25:13768149-13768029 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 117-239 |
| Cow position: | chr25:20203099-20202972 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr25:26072372-26072502 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 117-239 |
| Cow position: | chr25:27595751-27595623 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 118-237 |
| Cow position: | chr25:38958134-38958016 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 119-239 |
| Cow position: | chr25:18720938-18721061 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 123-239 |
| Cow position: | chr25:20023209-20023327 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 130-238 |
| Cow position: | chr25:9107355-9107464 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 139-239 |
| Cow position: | chr25:23244838-23244943 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.