Cow genome map
| Conread name: | rhlv25b_g20.y1 |
| Conread position: | 75-238 |
| Cow position: | chr29:33550940-33551105 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 83-238 |
| Cow position: | chr29:12890903-12890742 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 93-239 |
| Cow position: | chr29:41112674-41112822 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 100-239 |
| Cow position: | chr29:10839151-10839000 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 101-232 |
| Cow position: | chr29:570637-570773 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 101-237 |
| Cow position: | chr29:32215912-32215769 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 101-239 |
| Cow position: | chr29:7290978-7290835 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 101-239 |
| Cow position: | chr29:7414702-7414561 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 101-239 |
| Cow position: | chr29:14761656-14761513 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 67, 59 |
| Conread position: | 101-239 |
| Cow position: | chr29:22162053-22162190 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 81 |
| Conread position: | 102-239 |
| Cow position: | chr29:28066688-28066546 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 103-239 |
| Cow position: | chr29:936409-936266 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 107-238 |
| Cow position: | chr29:40117766-40117631 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 107-239 |
| Cow position: | chr29:17110155-17110016 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 109-239 |
| Cow position: | chr29:10058343-10058477 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 52, 107 |
| Conread position: | 109-239 |
| Cow position: | chr29:29308382-29308512 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 116-237 |
| Cow position: | chr29:19762456-19762329 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 116-237 |
| Cow position: | chr29:22729758-22729628 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-238 |
| Cow position: | chr29:11887454-11887328 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 116-238 |
| Cow position: | chr29:19363901-19363770 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-238 |
| Cow position: | chr29:25669276-25669154 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 116-238 |
| Cow position: | chr29:36781117-36781244 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-238 |
| Cow position: | chr29:44985454-44985332 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 116-239 |
| Cow position: | chr29:7624358-7624237 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 116-239 |
| Cow position: | chr29:9378828-9378696 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 116-239 |
| Cow position: | chr29:19742024-19741900 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 116-239 |
| Cow position: | chr29:19949498-19949366 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr29:24660870-24660744 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 116-239 |
| Cow position: | chr29:25737227-25737355 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 116-239 |
| Cow position: | chr29:26779069-26778941 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-239 |
| Cow position: | chr29:31593964-31594087 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 116-239 |
| Cow position: | chr29:36357321-36357185 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr29:40112572-40112441 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 117-239 |
| Cow position: | chr29:22028769-22028896 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 117-239 |
| Cow position: | chr29:35501473-35501595 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 118-237 |
| Cow position: | chr29:4070811-4070685 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 118-237 |
| Cow position: | chr29:22736545-22736424 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 118-239 |
| Cow position: | chr29:1946724-1946849 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 118-239 |
| Cow position: | chr29:28196829-28196949 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 118-239 |
| Cow position: | chr29:32963714-32963596 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 119-239 |
| Cow position: | chr29:33143166-33143295 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 130-239 |
| Cow position: | chr29:22723775-22723660 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 139-239 |
| Cow position: | chr29:23825045-23825151 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.