Cow genome map
| Conread name: | rhlv25b_g20.y1 |
| Conread position: | 56-237 |
| Cow position: | chr6:41226554-41226730 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 69-237 |
| Cow position: | chr6:60850982-60850803 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 82-239 |
| Cow position: | chr6:38033126-38032958 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 95-237 |
| Cow position: | chr6:47672897-47673045 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 97-239 |
| Cow position: | chr6:45690366-45690509 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 101-239 |
| Cow position: | chr6:5600617-5600760 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 101-239 |
| Cow position: | chr6:21346903-21347050 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 101-239 |
| Cow position: | chr6:24468147-24468295 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 101-239 |
| Cow position: | chr6:44194305-44194448 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 101-239 |
| Cow position: | chr6:50504706-50504557 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 101-239 |
| Cow position: | chr6:54406556-54406699 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 102-237 |
| Cow position: | chr6:53460323-53460464 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 103-239 |
| Cow position: | chr6:61110029-61109887 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 107-239 |
| Cow position: | chr6:1941591-1941731 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 107-239 |
| Cow position: | chr6:32866978-32867118 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 107-239 |
| Cow position: | chr6:47575134-47575007 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 109-239 |
| Cow position: | chr6:32006215-32006354 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 114-239 |
| Cow position: | chr6:53024575-53024703 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 116-233 |
| Cow position: | chr6:24186368-24186491 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 116-234 |
| Cow position: | chr6:48097369-48097493 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-234 |
| Cow position: | chr6:67069581-67069705 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 116-236 |
| Cow position: | chr6:35341953-35342076 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-237 |
| Cow position: | chr6:19264267-19264396 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 116-237 |
| Cow position: | chr6:53546263-53546138 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 116-238 |
| Cow position: | chr6:17068421-17068546 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 116-238 |
| Cow position: | chr6:48278661-48278787 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:120471-120346 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:10105749-10105878 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:17414216-17414344 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:23696228-23696101 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 116-239 |
| Cow position: | chr6:30024111-30023986 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:50577749-50577621 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:51933773-51933652 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 116-239 |
| Cow position: | chr6:52478177-52478310 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:62849155-62849026 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 116-239 |
| Cow position: | chr6:66058475-66058607 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 117-234 |
| Cow position: | chr6:8094053-8094172 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 117-239 |
| Cow position: | chr6:7291544-7291416 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 117-239 |
| Cow position: | chr6:60143966-60144097 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 118-239 |
| Cow position: | chr6:57545997-57546128 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 119-237 |
| Cow position: | chr6:63182516-63182391 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 119-239 |
| Cow position: | chr6:38640462-38640334 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 124-239 |
| Cow position: | chr6:40682442-40682565 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 139-239 |
| Cow position: | chr6:2757990-2757885 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 144-239 |
| Cow position: | chr6:24008842-24008936 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.