Cow genome map


           Conread name:
           rhlv28b_m5.y1
        

               Conread position:
               452-579
               

               Cow position:
               chr16:20025605-20025731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               453-589
               

               Cow position:
               chr16:24142870-24142737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               457-573
               

               Cow position:
               chr16:11922923-11922805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               457-578
               

               Cow position:
               chr16:13725952-13726075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               457-583
               

               Cow position:
               chr16:11422404-11422525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               457-584
               

               Cow position:
               chr16:51239127-51239000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               458-583
               

               Cow position:
               chr16:7550095-7550220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               460-583
               

               Cow position:
               chr16:12091567-12091441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               471-602
               

               Cow position:
               chr16:48340296-48340166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 111
               

               Conread position:
               477-571
               

               Cow position:
               chr16:15726248-15726154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               483-577
               

               Cow position:
               chr16:3304145-3304240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 39
               

               Conread position:
               484-590
               

               Cow position:
               chr16:7727930-7727822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               
Show alignments to all cow chromosomes.