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Cow genome map

           
Conread name:
           
rhyp10c_i19.y1
        

               
Conread position:
               
30-291
               

               
Cow position:
               
chr27:22747999-22748257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
58-288
               

               
Cow position:
               
chr27:9253418-9253187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
62-323
               

               
Cow position:
               
chr27:31231380-31231120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
65-370
               

               
Cow position:
               
chr27:20354307-20354597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
66-356
               

               
Cow position:
               
chr27:23128174-23128448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
68-264
               

               
Cow position:
               
chr27:27012405-27012601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
188, 78
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr27:11323031-11323299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
70-346
               

               
Cow position:
               
chr27:19607951-19607675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
70-384
               

               
Cow position:
               
chr27:16307815-16308121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
72-307
               

               
Cow position:
               
chr27:19293100-19292866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
72-350
               

               
Cow position:
               
chr27:15315239-15315505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
73-326
               

               
Cow position:
               
chr27:15240781-15241020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
227, 7
               

               
Conread position:
               
73-344
               

               
Cow position:
               
chr27:29185130-29184855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
73-345
               

               
Cow position:
               
chr27:30914722-30914992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 44
               

               
Conread position:
               
74-345
               

               
Cow position:
               
chr27:20045609-20045873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
75-346
               

               
Cow position:
               
chr27:15238458-15238728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
78-278
               

               
Cow position:
               
chr27:26317788-26317982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
180, 44
               

               
Conread position:
               
79-283
               

               
Cow position:
               
chr27:21419458-21419269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
80-315
               

               
Cow position:
               
chr27:19483381-19483148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
82-293
               

               
Cow position:
               
chr27:23232636-23232847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
82-296
               

               
Cow position:
               
chr27:11940520-11940292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
82-308
               

               
Cow position:
               
chr27:29526684-29526908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
82-308
               

               
Cow position:
               
chr27:31209214-31208991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
83-319
               

               
Cow position:
               
chr27:19741668-19741451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
83-339
               

               
Cow position:
               
chr27:11480913-11480659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
83-344
               

               
Cow position:
               
chr27:28002078-28001830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
83-346
               

               
Cow position:
               
chr27:23918310-23918050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
83-346
               

               
Cow position:
               
chr27:24393715-24393981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
84-282
               

               
Cow position:
               
chr27:22583467-22583667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
84-286
               

               
Cow position:
               
chr27:18873780-18873972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
172, 46
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr27:24356760-24356984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
84-317
               

               
Cow position:
               
chr27:18791784-18791554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
84-340
               

               
Cow position:
               
chr27:672390-672633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
85-292
               

               
Cow position:
               
chr27:10581265-10581464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
202, 17
               

               
Conread position:
               
85-317
               

               
Cow position:
               
chr27:4414085-4413863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr27:6330358-6330608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
85-359
               

               
Cow position:
               
chr27:24303671-24303943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
86-290
               

               
Cow position:
               
chr27:26983889-26984090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr27:22427107-22426862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 49
               

               
Conread position:
               
86-343
               

               
Cow position:
               
chr27:27405338-27405085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
86-346
               

               
Cow position:
               
chr27:1768897-1768641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
86-351
               

               
Cow position:
               
chr27:11816022-11815757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
87-349
               

               
Cow position:
               
chr27:20501559-20501828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
171, 112
               

               
Conread position:
               
88-205
               

               
Cow position:
               
chr27:11080576-11080692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
88-330
               

               
Cow position:
               
chr27:15926526-15926764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
88-331
               

               
Cow position:
               
chr27:7801795-7802040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
88-346
               

               
Cow position:
               
chr27:6550192-6550441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
88-348
               

               
Cow position:
               
chr27:7971294-7971549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
88-348
               

               
Cow position:
               
chr27:18507377-18507636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
88-349
               

               
Cow position:
               
chr27:20719014-20719276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
88-365
               

               
Cow position:
               
chr27:20514557-20514820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
89-275
               

               
Cow position:
               
chr27:18813812-18813626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
89-294
               

               
Cow position:
               
chr27:15350619-15350415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
89-300
               

               
Cow position:
               
chr27:9504284-9504491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
169, 30
               

               
Conread position:
               
89-314
               

               
Cow position:
               
chr27:28016000-28015783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
89-315
               

               
Cow position:
               
chr27:4264968-4264740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
89-323
               

               
Cow position:
               
chr27:25428176-25427947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
169, 10
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr27:31452072-31452313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
89-333
               

               
Cow position:
               
chr27:22220281-22220525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
89-343
               

               
Cow position:
               
chr27:13841091-13841350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr27:426698-426952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr27:10404383-10404133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr27:23147896-23148149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr27:6499790-6500045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr27:13875464-13875712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 28
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr27:23859887-23860145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr27:26226559-26226307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
89-346
               

               
Cow position:
               
chr27:31169372-31169126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
169, 13
               

               
Conread position:
               
89-348
               

               
Cow position:
               
chr27:15870889-15871147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
89-348
               

               
Cow position:
               
chr27:31373241-31372997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr27:1353312-1353570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 28
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr27:13255062-13254810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr27:13639258-13638996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
89-350
               

               
Cow position:
               
chr27:7304876-7304615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
89-361
               

               
Cow position:
               
chr27:31170340-31170067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 37
               

               
Conread position:
               
89-394
               

               
Cow position:
               
chr27:29458059-29458373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr27:24240086-24240297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
90-305
               

               
Cow position:
               
chr27:9338253-9338040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
183, 29
               

               
Conread position:
               
90-314
               

               
Cow position:
               
chr27:6282564-6282785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
90-343
               

               
Cow position:
               
chr27:26509421-26509177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
90-344
               

               
Cow position:
               
chr27:31386904-31386648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
90-347
               

               
Cow position:
               
chr27:212682-212940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
90-347
               

               
Cow position:
               
chr27:26173230-26173482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
90-349
               

               
Cow position:
               
chr27:27554948-27554693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
90-350
               

               
Cow position:
               
chr27:26121492-26121747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 8
               

               
Conread position:
               
91-219
               

               
Cow position:
               
chr27:28058169-28058296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
91-284
               

               
Cow position:
               
chr27:1292477-1292669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
91-301
               

               
Cow position:
               
chr27:21201922-21202132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
91-304
               

               
Cow position:
               
chr27:11208823-11208612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
165, 20
               

               
Conread position:
               
91-305
               

               
Cow position:
               
chr27:26314394-26314180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
91-307
               

               
Cow position:
               
chr27:21677696-21677479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
91-313
               

               
Cow position:
               
chr27:29308075-29308294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
91-329
               

               
Cow position:
               
chr27:26245814-26245580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
91-336
               

               
Cow position:
               
chr27:19496613-19496858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr27:5744591-5744848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
91-346
               

               
Cow position:
               
chr27:19500506-19500249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
91-348
               

               
Cow position:
               
chr27:2886105-2885846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
92-287
               

               
Cow position:
               
chr27:11528660-11528856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
92-289
               

               
Cow position:
               
chr27:30884765-30884955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
147, 25
               

               
Conread position:
               
92-315
               

               
Cow position:
               
chr27:13801540-13801762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
92-344
               

               
Cow position:
               
chr27:29991728-29991465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
92-345
               

               
Cow position:
               
chr27:17995206-17994959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
166, 34
               

               
Conread position:
               
92-355
               

               
Cow position:
               
chr27:10323575-10323829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
93-222
               

               
Cow position:
               
chr27:31479009-31479137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
93-257
               

               
Cow position:
               
chr27:11986561-11986397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
93-267
               

               
Cow position:
               
chr27:21054193-21054365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
93-288
               

               
Cow position:
               
chr27:29246410-29246221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 53
               

               
Conread position:
               
93-305
               

               
Cow position:
               
chr27:31157546-31157755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
166, 33
               

               
Conread position:
               
93-313
               

               
Cow position:
               
chr27:11133823-11134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
93-339
               

               
Cow position:
               
chr27:18558092-18558334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 53
               

               
Conread position:
               
93-344
               

               
Cow position:
               
chr27:26323175-26323427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
93-346
               

               
Cow position:
               
chr27:2592271-2592527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
93-346
               

               
Cow position:
               
chr27:22560092-22559843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
93-346
               

               
Cow position:
               
chr27:23560296-23560047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
93-347
               

               
Cow position:
               
chr27:15867128-15867382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
93-348
               

               
Cow position:
               
chr27:4944774-4944528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
93-348
               

               
Cow position:
               
chr27:12564692-12564439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
166, 20
               

               
Conread position:
               
93-348
               

               
Cow position:
               
chr27:12709981-12710235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
93-348
               

               
Cow position:
               
chr27:16088526-16088794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
93-348
               

               
Cow position:
               
chr27:26852847-26852600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
94-242
               

               
Cow position:
               
chr27:28472957-28472811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
94-252
               

               
Cow position:
               
chr27:22181797-22181961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
94-264
               

               
Cow position:
               
chr27:1779115-1778953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
94-279
               

               
Cow position:
               
chr27:29877739-29877555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
94-286
               

               
Cow position:
               
chr27:25139653-25139839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
94-306
               

               
Cow position:
               
chr27:18987955-18988167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
94-311
               

               
Cow position:
               
chr27:23941214-23940999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
167, 23
               

               
Conread position:
               
94-315
               

               
Cow position:
               
chr27:28253975-28254191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
94-320
               

               
Cow position:
               
chr27:26400987-26400763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr27:22035636-22035408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
94-344
               

               
Cow position:
               
chr27:7412127-7412375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
94-346
               

               
Cow position:
               
chr27:12515931-12516177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
94-346
               

               
Cow position:
               
chr27:19669068-19668816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
213, 32
               

               
Conread position:
               
94-348
               

               
Cow position:
               
chr27:25151825-25152071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr27:14269593-14269356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr27:24007200-24007455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
162, 52
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr27:27020360-27020119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
94-355
               

               
Cow position:
               
chr27:28467729-28467458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
94-359
               

               
Cow position:
               
chr27:29319142-29319406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
95-305
               

               
Cow position:
               
chr27:1810352-1810144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
163, 51
               

               
Conread position:
               
95-334
               

               
Cow position:
               
chr27:20548547-20548783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
95-344
               

               
Cow position:
               
chr27:28922156-28921912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 16
               

               
Conread position:
               
95-346
               

               
Cow position:
               
chr27:15865347-15865591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
95-348
               

               
Cow position:
               
chr27:17397711-17397468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
95-349
               

               
Cow position:
               
chr27:27438769-27438516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 13
               

               
Conread position:
               
95-349
               

               
Cow position:
               
chr27:30764773-30765018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
95-350
               

               
Cow position:
               
chr27:7935418-7935168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
95-370
               

               
Cow position:
               
chr27:2957156-2957418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
96-257
               

               
Cow position:
               
chr27:22614593-22614755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
96-291
               

               
Cow position:
               
chr27:31183311-31183505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
96-301
               

               
Cow position:
               
chr27:21951245-21951039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
96-321
               

               
Cow position:
               
chr27:7346407-7346631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
96-347
               

               
Cow position:
               
chr27:6924818-6925070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
96-355
               

               
Cow position:
               
chr27:4390520-4390258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
96-375
               

               
Cow position:
               
chr27:11982907-11982630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 11
               

               
Conread position:
               
97-257
               

               
Cow position:
               
chr27:30458896-30458736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr27:27450142-27449957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
97-305
               

               
Cow position:
               
chr27:6679637-6679431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
97-331
               

               
Cow position:
               
chr27:21669372-21669148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
97-347
               

               
Cow position:
               
chr27:23594060-23594306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 20
               

               
Conread position:
               
98-315
               

               
Cow position:
               
chr27:1184435-1184224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
99-250
               

               
Cow position:
               
chr27:20785860-20786011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
99-251
               

               
Cow position:
               
chr27:6751920-6752069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
99-290
               

               
Cow position:
               
chr27:11145621-11145807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
99-313
               

               
Cow position:
               
chr27:12284732-12284945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
99-323
               

               
Cow position:
               
chr27:28301149-28300927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
99-334
               

               
Cow position:
               
chr27:20612262-20612494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
99-343
               

               
Cow position:
               
chr27:31248866-31248638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
99-346
               

               
Cow position:
               
chr27:18543730-18543976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 18
               

               
Conread position:
               
99-348
               

               
Cow position:
               
chr27:21408831-21408577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr27:11349024-11349222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
100-316
               

               
Cow position:
               
chr27:20591668-20591883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
100-346
               

               
Cow position:
               
chr27:31151124-31151365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
100-348
               

               
Cow position:
               
chr27:23484960-23485194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
101-301
               

               
Cow position:
               
chr27:18491299-18491495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr27:28896621-28896864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
102-257
               

               
Cow position:
               
chr27:26467816-26467664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
102-257
               

               
Cow position:
               
chr27:30441446-30441599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
102-268
               

               
Cow position:
               
chr27:4487034-4486871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
102-275
               

               
Cow position:
               
chr27:19074279-19074109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
102-295
               

               
Cow position:
               
chr27:27898058-27897867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
190, 24
               

               
Conread position:
               
102-300
               

               
Cow position:
               
chr27:24559837-24559637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
102-306
               

               
Cow position:
               
chr27:18752591-18752800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
102-306
               

               
Cow position:
               
chr27:20127554-20127353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
102-307
               

               
Cow position:
               
chr27:31498530-31498724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
102-317
               

               
Cow position:
               
chr27:13181648-13181866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
102-317
               

               
Cow position:
               
chr27:15237556-15237768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
102-320
               

               
Cow position:
               
chr27:29614780-29615000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
102-322
               

               
Cow position:
               
chr27:16246552-16246767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
102-329
               

               
Cow position:
               
chr27:23527057-23527280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
102-332
               

               
Cow position:
               
chr27:20828963-20828740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
102-333
               

               
Cow position:
               
chr27:6106451-6106671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
156, 23
               

               
Conread position:
               
102-333
               

               
Cow position:
               
chr27:12658610-12658376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
102-335
               

               
Cow position:
               
chr27:28932057-28931831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
102-343
               

               
Cow position:
               
chr27:26163147-26163387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
102-345
               

               
Cow position:
               
chr27:28279924-28280168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
193, 15
               

               
Conread position:
               
102-345
               

               
Cow position:
               
chr27:30869012-30868757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
102-346
               

               
Cow position:
               
chr27:15204493-15204246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
102-346
               

               
Cow position:
               
chr27:19508757-19508996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
102-346
               

               
Cow position:
               
chr27:27558762-27558521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
201, 44
               

               
Conread position:
               
102-347
               

               
Cow position:
               
chr27:1190736-1190490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr27:8168679-8168444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 45
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr27:26437376-26437135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
102-349
               

               
Cow position:
               
chr27:26794039-26793796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
102-349
               

               
Cow position:
               
chr27:26883515-26883269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
102-353
               

               
Cow position:
               
chr27:10598730-10598981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
103-308
               

               
Cow position:
               
chr27:29892469-29892671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
153, 8
               

               
Conread position:
               
103-346
               

               
Cow position:
               
chr27:19896502-19896739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
103-346
               

               
Cow position:
               
chr27:24228060-24227810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
103-346
               

               
Cow position:
               
chr27:30872313-30872075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 45
               

               
Conread position:
               
103-349
               

               
Cow position:
               
chr27:10582115-10582359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
104-282
               

               
Cow position:
               
chr27:2036473-2036640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr27:27442416-27442200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
104-359
               

               
Cow position:
               
chr27:29388416-29388668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
105-275
               

               
Cow position:
               
chr27:30991209-30991381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 19
               

               
Conread position:
               
105-290
               

               
Cow position:
               
chr27:31153811-31153629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
105-304
               

               
Cow position:
               
chr27:29249334-29249534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
105-305
               

               
Cow position:
               
chr27:2325756-2325964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
105-316
               

               
Cow position:
               
chr27:22792586-22792784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
105-337
               

               
Cow position:
               
chr27:16705000-16705226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
105-347
               

               
Cow position:
               
chr27:26565542-26565775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
214, 12
               

               
Conread position:
               
106-297
               

               
Cow position:
               
chr27:17908515-17908324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
106-332
               

               
Cow position:
               
chr27:7959084-7958860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
107-273
               

               
Cow position:
               
chr27:26154065-26154232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
107-346
               

               
Cow position:
               
chr27:20078614-20078848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
107-346
               

               
Cow position:
               
chr27:21990891-21991136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
107-348
               

               
Cow position:
               
chr27:12425036-12425277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
151, 39
               

               
Conread position:
               
107-349
               

               
Cow position:
               
chr27:8062604-8062362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
108-249
               

               
Cow position:
               
chr27:16886849-16886988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
108-256
               

               
Cow position:
               
chr27:19653827-19653678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr27:25000220-25000043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
108-297
               

               
Cow position:
               
chr27:24205132-24205319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
108-301
               

               
Cow position:
               
chr27:20266475-20266286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
108-301
               

               
Cow position:
               
chr27:26980217-26980023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
108-306
               

               
Cow position:
               
chr27:20048386-20048578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
108-311
               

               
Cow position:
               
chr27:11507513-11507314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
108-313
               

               
Cow position:
               
chr27:20484484-20484681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
108-313
               

               
Cow position:
               
chr27:27828105-27827900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
108-315
               

               
Cow position:
               
chr27:26236076-26236279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
108-328
               

               
Cow position:
               
chr27:3518252-3518471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
108-329
               

               
Cow position:
               
chr27:19452745-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
108-331
               

               
Cow position:
               
chr27:13940799-13940588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
108-331
               

               
Cow position:
               
chr27:14817982-14818202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
108-331
               

               
Cow position:
               
chr27:20653508-20653286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr27:15332539-15332317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr27:24223704-24223933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
108-342
               

               
Cow position:
               
chr27:12187373-12187142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
108-343
               

               
Cow position:
               
chr27:10658928-10659162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
150, 9
               

               
Conread position:
               
108-345
               

               
Cow position:
               
chr27:6290224-6290457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr27:5553221-5553453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr27:7649843-7649597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
108-346
               

               
Cow position:
               
chr27:19387768-19388001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
108-347
               

               
Cow position:
               
chr27:17933671-17933911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
108-348
               

               
Cow position:
               
chr27:7343680-7343442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
108-348
               

               
Cow position:
               
chr27:22513931-22513691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
108-348
               

               
Cow position:
               
chr27:29798702-29798939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
108-348
               

               
Cow position:
               
chr27:30407297-30407051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
108-349
               

               
Cow position:
               
chr27:6541385-6541615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
108-349
               

               
Cow position:
               
chr27:15925092-15925333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
108-349
               

               
Cow position:
               
chr27:19932816-19933050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
108-353
               

               
Cow position:
               
chr27:10307555-10307308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
108-356
               

               
Cow position:
               
chr27:11435576-11435329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 14
               

               
Conread position:
               
108-370
               

               
Cow position:
               
chr27:19681699-19681960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 9
               

               
Conread position:
               
108-405
               

               
Cow position:
               
chr27:27740545-27740250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
109-271
               

               
Cow position:
               
chr27:21101541-21101381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
109-279
               

               
Cow position:
               
chr27:12948045-12947877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
109-287
               

               
Cow position:
               
chr27:28095703-28095526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr27:4544599-4544412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
109-303
               

               
Cow position:
               
chr27:13236688-13236493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr27:1981092-1981313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
109-338
               

               
Cow position:
               
chr27:7537431-7537660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
109-346
               

               
Cow position:
               
chr27:16786583-16786812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
149, 17
               

               
Conread position:
               
109-348
               

               
Cow position:
               
chr27:30261146-30260903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
109-349
               

               
Cow position:
               
chr27:26112170-26111927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr27:22401234-22401481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
111-275
               

               
Cow position:
               
chr27:19805942-19805783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
111-279
               

               
Cow position:
               
chr27:19779631-19779794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
111-290
               

               
Cow position:
               
chr27:1674541-1674375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
111-327
               

               
Cow position:
               
chr27:20628809-20629034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr27:23507399-23507622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
111-335
               

               
Cow position:
               
chr27:13204216-13204432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
111-346
               

               
Cow position:
               
chr27:23994661-23994436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
111-348
               

               
Cow position:
               
chr27:22439889-22440129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
112-346
               

               
Cow position:
               
chr27:31210302-31210530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
112-349
               

               
Cow position:
               
chr27:26087071-26087291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr27:15434077-15434249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
113-327
               

               
Cow position:
               
chr27:14249090-14249299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
113-337
               

               
Cow position:
               
chr27:26118251-26118473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
145, 33
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr27:20584712-20584474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr27:16512413-16512187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr27:18435377-18435148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
113-346
               

               
Cow position:
               
chr27:22245396-22245610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
113-347
               

               
Cow position:
               
chr27:591017-590777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
113-349
               

               
Cow position:
               
chr27:11561529-11561763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 30
               

               
Conread position:
               
114-267
               

               
Cow position:
               
chr27:22150939-22150789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
114-301
               

               
Cow position:
               
chr27:11454417-11454230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
114-303
               

               
Cow position:
               
chr27:31515798-31515608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr27:19576570-19576365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
114-346
               

               
Cow position:
               
chr27:10979615-10979847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
114-346
               

               
Cow position:
               
chr27:15669019-15668787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 32
               

               
Conread position:
               
114-347
               

               
Cow position:
               
chr27:27389273-27389036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr27:17646399-17646175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
114-370
               

               
Cow position:
               
chr27:20283398-20283655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
117-275
               

               
Cow position:
               
chr27:23760220-23760068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 29
               

               
Conread position:
               
117-346
               

               
Cow position:
               
chr27:16103566-16103791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
118-335
               

               
Cow position:
               
chr27:2901506-2901290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 28
               

               
Conread position:
               
118-348
               

               
Cow position:
               
chr27:18646390-18646160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
141, 28
               

               
Conread position:
               
118-349
               

               
Cow position:
               
chr27:30374824-30374581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
119-316
               

               
Cow position:
               
chr27:18688652-18688455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
119-326
               

               
Cow position:
               
chr27:19557153-19557349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 20
               

               
Conread position:
               
119-339
               

               
Cow position:
               
chr27:22455033-22454798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
119-345
               

               
Cow position:
               
chr27:28518053-28518281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
119-415
               

               
Cow position:
               
chr27:15003220-15002924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
120-355
               

               
Cow position:
               
chr27:29593866-29593636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
121-275
               

               
Cow position:
               
chr27:26624968-26625122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
121-299
               

               
Cow position:
               
chr27:11464671-11464493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
121-301
               

               
Cow position:
               
chr27:9956672-9956492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
121-305
               

               
Cow position:
               
chr27:14472415-14472240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
121-324
               

               
Cow position:
               
chr27:17102662-17102858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
121-346
               

               
Cow position:
               
chr27:22550008-22549783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
121-346
               

               
Cow position:
               
chr27:29693229-29693462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
122-344
               

               
Cow position:
               
chr27:6319685-6319901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
122-346
               

               
Cow position:
               
chr27:7731512-7731273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr27:22489037-22489246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
124-345
               

               
Cow position:
               
chr27:24331479-24331703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
124-349
               

               
Cow position:
               
chr27:11151436-11151656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
125-301
               

               
Cow position:
               
chr27:30997063-30996889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
125-326
               

               
Cow position:
               
chr27:24693184-24693377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
127-257
               

               
Cow position:
               
chr27:20826029-20825896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
127-278
               

               
Cow position:
               
chr27:16505138-16504994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
127-283
               

               
Cow position:
               
chr27:10994458-10994615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
127-286
               

               
Cow position:
               
chr27:178631-178787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
127-313
               

               
Cow position:
               
chr27:22267988-22268176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
127-317
               

               
Cow position:
               
chr27:5539924-5539740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
127-336
               

               
Cow position:
               
chr27:12596550-12596745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
127-346
               

               
Cow position:
               
chr27:16275912-16275678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
127-346
               

               
Cow position:
               
chr27:27058637-27058421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
127-347
               

               
Cow position:
               
chr27:21978375-21978150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
127-348
               

               
Cow position:
               
chr27:19546753-19546527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
127-349
               

               
Cow position:
               
chr27:2644330-2644103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
128-251
               

               
Cow position:
               
chr27:700325-700203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
128-294
               

               
Cow position:
               
chr27:23177543-23177380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
128-305
               

               
Cow position:
               
chr27:26909819-26909648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
128-314
               

               
Cow position:
               
chr27:232320-232506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
130, 21
               

               
Conread position:
               
128-329
               

               
Cow position:
               
chr27:27648546-27648350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
128-335
               

               
Cow position:
               
chr27:23554560-23554356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
127, 18
               

               
Conread position:
               
128-335
               

               
Cow position:
               
chr27:29160215-29160013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
128-338
               

               
Cow position:
               
chr27:26490136-26489932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
128-343
               

               
Cow position:
               
chr27:22735825-22735611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
128-345
               

               
Cow position:
               
chr27:19660697-19660915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
128-346
               

               
Cow position:
               
chr27:11994098-11993882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
128-346
               

               
Cow position:
               
chr27:20637289-20637078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
128-356
               

               
Cow position:
               
chr27:30266851-30267081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr27:22254560-22254751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
129-338
               

               
Cow position:
               
chr27:26188597-26188805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
129-339
               

               
Cow position:
               
chr27:22602945-22603156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
129-340
               

               
Cow position:
               
chr27:26920156-26919933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr27:13318207-13317990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
129-346
               

               
Cow position:
               
chr27:30455763-30455978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 17
               

               
Conread position:
               
130-292
               

               
Cow position:
               
chr27:23930866-23930707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr27:24731267-24731064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
181, 16
               

               
Conread position:
               
130-343
               

               
Cow position:
               
chr27:5982986-5983198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr27:10653453-10653670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr27:27695004-27694787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr27:18739145-18739364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
132-317
               

               
Cow position:
               
chr27:24755764-24755943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
132-345
               

               
Cow position:
               
chr27:23890706-23890921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr27:29380635-29380847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
134-301
               

               
Cow position:
               
chr27:23060341-23060174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
134-303
               

               
Cow position:
               
chr27:14701867-14701698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 12
               

               
Conread position:
               
136-301
               

               
Cow position:
               
chr27:12432381-12432216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
136-339
               

               
Cow position:
               
chr27:16231163-16230957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
138-344
               

               
Cow position:
               
chr27:28478363-28478562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
138-355
               

               
Cow position:
               
chr27:24709333-24709546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr27:6674048-6674291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
140-275
               

               
Cow position:
               
chr27:22236902-22237037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
143-301
               

               
Cow position:
               
chr27:18912738-18912584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
145-336
               

               
Cow position:
               
chr27:29603603-29603792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
146-347
               

               
Cow position:
               
chr27:18884413-18884614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
147-305
               

               
Cow position:
               
chr27:14005203-14005353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
147-346
               

               
Cow position:
               
chr27:19485658-19485858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
149-335
               

               
Cow position:
               
chr27:16107779-16107588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
149-346
               

               
Cow position:
               
chr27:14303529-14303722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
151-325
               

               
Cow position:
               
chr27:30605489-30605661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 51
               

               
Conread position:
               
153-305
               

               
Cow position:
               
chr27:24726238-24726086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 144
               

               
Conread position:
               
154-316
               

               
Cow position:
               
chr27:27747674-27747511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
154-331
               

               
Cow position:
               
chr27:14841393-14841215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
155-349
               

               
Cow position:
               
chr27:23632395-23632583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
156-345
               

               
Cow position:
               
chr27:15866015-15866200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
156-347
               

               
Cow position:
               
chr27:27641218-27641027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
159-344
               

               
Cow position:
               
chr27:24022938-24023125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
162-349
               

               
Cow position:
               
chr27:15825921-15825735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 162
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr27:1291044-1290856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
168-346
               

               
Cow position:
               
chr27:28260726-28260552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
173-312
               

               
Cow position:
               
chr27:16205599-16205737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
173-347
               

               
Cow position:
               
chr27:26218522-26218687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr27:22423329-22423523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr27:6302654-6302483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 68
               

               
Conread position:
               
178-338
               

               
Cow position:
               
chr27:30354531-30354368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
178-348
               

               
Cow position:
               
chr27:28271335-28271164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
181-370
               

               
Cow position:
               
chr27:17918493-17918302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
182-344
               

               
Cow position:
               
chr27:14957906-14957748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
183-308
               

               
Cow position:
               
chr27:29658894-29658769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
183-338
               

               
Cow position:
               
chr27:30908492-30908648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
183-344
               

               
Cow position:
               
chr27:15642995-15643155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
183-344
               

               
Cow position:
               
chr27:30359227-30359389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
183-345
               

               
Cow position:
               
chr27:30988618-30988780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr27:23040899-23041065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
183-349
               

               
Cow position:
               
chr27:31018003-31017843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
183-350
               

               
Cow position:
               
chr27:22723874-22723705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
183-365
               

               
Cow position:
               
chr27:4155820-4156001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 13
               

               
Conread position:
               
184-346
               

               
Cow position:
               
chr27:15343456-15343295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
184-349
               

               
Cow position:
               
chr27:23877023-23876865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr27:15215050-15215213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr27:18923009-18922849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr27:23895248-23895404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
187-312
               

               
Cow position:
               
chr27:30665252-30665126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
188-339
               

               
Cow position:
               
chr27:1789313-1789162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 126
               

               
Conread position:
               
188-347
               

               
Cow position:
               
chr27:27673190-27673031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
189-356
               

               
Cow position:
               
chr27:25276970-25277134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
192-346
               

               
Cow position:
               
chr27:20803829-20803675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
193-346
               

               
Cow position:
               
chr27:10992185-10992337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
197-346
               

               
Cow position:
               
chr27:21453260-21453110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
197-346
               

               
Cow position:
               
chr27:26347777-26347631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
199-344
               

               
Cow position:
               
chr27:26413418-26413272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
201-356
               

               
Cow position:
               
chr27:8263500-8263343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
203-332
               

               
Cow position:
               
chr27:19004484-19004353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
209-332
               

               
Cow position:
               
chr27:16455536-16455407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
219-348
               

               
Cow position:
               
chr27:715357-715486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
228-349
               

               
Cow position:
               
chr27:21144811-21144933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
235-370
               

               
Cow position:
               
chr27:30672686-30672551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
246-346
               

               
Cow position:
               
chr27:21975936-21976037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
278-459
               

               
Cow position:
               
chr27:1343683-1343498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               
Show alignments to all cow chromosomes.