Cow genome map
| Conread name: | rhyp12c_f18.y1 |
| Conread position: | 272-496 |
| Cow position: | chr11:63165434-63165673 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 274-409 |
| Cow position: | chr11:63547034-63546897 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 281-398 |
| Cow position: | chr11:62226217-62226100 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 284-410 |
| Cow position: | chr11:25721800-25721922 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 286-406 |
| Cow position: | chr11:66685708-66685826 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 287-395 |
| Cow position: | chr11:72405945-72406053 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-410 |
| Cow position: | chr11:31525455-31525577 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 287-412 |
| Cow position: | chr11:70821245-70821116 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 5 |
| Conread position: | 287-418 |
| Cow position: | chr11:44176797-44176660 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 288-410 |
| Cow position: | chr11:1625021-1625150 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 288-410 |
| Cow position: | chr11:3175869-3175748 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 288-410 |
| Cow position: | chr11:6784406-6784282 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 288-410 |
| Cow position: | chr11:32586926-32587049 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 288-410 |
| Cow position: | chr11:56115137-56115015 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 288-482 |
| Cow position: | chr11:15366776-15366985 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 288-498 |
| Cow position: | chr11:18915210-18914997 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 288-499 |
| Cow position: | chr11:18699071-18698850 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 288-499 |
| Cow position: | chr11:39060402-39060631 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 289-392 |
| Cow position: | chr11:30165710-30165608 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 289-410 |
| Cow position: | chr11:3704649-3704523 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 289-417 |
| Cow position: | chr11:63485132-63485003 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 289-427 |
| Cow position: | chr11:17889525-17889673 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 289-441 |
| Cow position: | chr11:18484000-18484157 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 131 |
| Conread position: | 289-446 |
| Cow position: | chr11:29782358-29782191 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 289-446 |
| Cow position: | chr11:62483772-62483936 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 289-450 |
| Cow position: | chr11:48383730-48383567 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 289-484 |
| Cow position: | chr11:9699054-9699259 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 289-484 |
| Cow position: | chr11:44032207-44031997 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 289-492 |
| Cow position: | chr11:62239941-62239722 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 78 |
| Conread position: | 289-499 |
| Cow position: | chr11:897864-897644 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 289-499 |
| Cow position: | chr11:55911447-55911663 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 290-383 |
| Cow position: | chr11:76995095-76995188 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 290-413 |
| Cow position: | chr11:81340344-81340469 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 290-499 |
| Cow position: | chr11:30355245-30355029 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 291-389 |
| Cow position: | chr11:2575597-2575697 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 291-409 |
| Cow position: | chr11:22720194-22720075 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 292-385 |
| Cow position: | chr11:14492370-14492463 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-386 |
| Cow position: | chr11:70745301-70745395 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-410 |
| Cow position: | chr11:62655888-62655768 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 292-410 |
| Cow position: | chr11:62742451-62742571 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 292-410 |
| Cow position: | chr11:72871094-72870978 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 292-410 |
| Cow position: | chr11:80824100-80823984 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 292-415 |
| Cow position: | chr11:40395634-40395507 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 292-417 |
| Cow position: | chr11:37565066-37564939 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 292-441 |
| Cow position: | chr11:42067061-42066896 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 292-446 |
| Cow position: | chr11:15591283-15591449 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 97 |
| Conread position: | 292-499 |
| Cow position: | chr11:2907337-2907552 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 45 |
| Conread position: | 292-499 |
| Cow position: | chr11:20238873-20238647 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 292-499 |
| Cow position: | chr11:27404874-27405099 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 179 |
| Conread position: | 292-499 |
| Cow position: | chr11:30172496-30172280 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 120, 102 |
| Conread position: | 292-499 |
| Cow position: | chr11:55053060-55052842 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 292-499 |
| Cow position: | chr11:75874575-75874784 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 151, 107 |
| Conread position: | 293-409 |
| Cow position: | chr11:63977251-63977133 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 293-410 |
| Cow position: | chr11:82732954-82733075 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 293-417 |
| Cow position: | chr11:28078685-28078559 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 293-439 |
| Cow position: | chr11:17369722-17369564 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 293-494 |
| Cow position: | chr11:47784976-47784750 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 293-499 |
| Cow position: | chr11:13061058-13061265 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 293-499 |
| Cow position: | chr11:18785700-18785898 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 293-499 |
| Cow position: | chr11:49057579-49057374 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 82, 157 |
| Conread position: | 293-499 |
| Cow position: | chr11:63470054-63469846 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 293-499 |
| Cow position: | chr11:63998894-63999117 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 93, 207 |
| Conread position: | 294-383 |
| Cow position: | chr11:47883018-47882930 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 294-392 |
| Cow position: | chr11:50197317-50197415 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-407 |
| Cow position: | chr11:19147946-19148060 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 294-417 |
| Cow position: | chr11:12742299-12742425 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 43 |
| Conread position: | 294-443 |
| Cow position: | chr11:75918774-75918622 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 294-446 |
| Cow position: | chr11:74839798-74839636 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 43 |
| Conread position: | 294-484 |
| Cow position: | chr11:15607794-15607986 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 294-495 |
| Cow position: | chr11:64044412-64044208 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 294-497 |
| Cow position: | chr11:80556413-80556195 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 82, 169 |
| Conread position: | 294-499 |
| Cow position: | chr11:27747113-27746894 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 116, 90 |
| Conread position: | 294-499 |
| Cow position: | chr11:52297028-52297249 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 83, 214 |
| Conread position: | 294-499 |
| Cow position: | chr11:55494859-55494650 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 295-417 |
| Cow position: | chr11:25620196-25620325 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 295-495 |
| Cow position: | chr11:15017252-15017031 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 295-497 |
| Cow position: | chr11:30494182-30493969 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 295-499 |
| Cow position: | chr11:27461917-27462127 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 119 |
| Conread position: | 295-499 |
| Cow position: | chr11:34646789-34646560 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 295-499 |
| Cow position: | chr11:42083647-42083443 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 89, 172 |
| Conread position: | 295-499 |
| Cow position: | chr11:42359287-42359085 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 149, 43 |
| Conread position: | 295-499 |
| Cow position: | chr11:62789321-62789101 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 296-410 |
| Cow position: | chr11:73076229-73076340 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 296-497 |
| Cow position: | chr11:67614732-67614949 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 296-499 |
| Cow position: | chr11:27248681-27248464 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 80, 167 |
| Conread position: | 297-409 |
| Cow position: | chr11:40818441-40818551 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 297-413 |
| Cow position: | chr11:65431709-65431590 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 297-445 |
| Cow position: | chr11:77017423-77017268 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 297-488 |
| Cow position: | chr11:46784655-46784456 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 297-494 |
| Cow position: | chr11:84764209-84764012 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 297-499 |
| Cow position: | chr11:16342056-16342258 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 146, 69 |
| Conread position: | 298-404 |
| Cow position: | chr11:73983799-73983907 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 298-410 |
| Cow position: | chr11:6638812-6638924 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 298-447 |
| Cow position: | chr11:57170419-57170573 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 298-499 |
| Cow position: | chr11:49153131-49152920 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 299-383 |
| Cow position: | chr11:47904426-47904342 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 77 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-398 |
| Cow position: | chr11:33311199-33311100 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-499 |
| Cow position: | chr11:80923136-80923350 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 299-499 |
| Cow position: | chr11:83043177-83043392 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 300-410 |
| Cow position: | chr11:34233632-34233521 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 300-410 |
| Cow position: | chr11:64335019-64334911 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 94, 38 |
| Conread position: | 300-434 |
| Cow position: | chr11:13042959-13043097 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 301-408 |
| Cow position: | chr11:13049071-13049181 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 301-425 |
| Cow position: | chr11:80296671-80296791 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 301-434 |
| Cow position: | chr11:42452718-42452854 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 301-495 |
| Cow position: | chr11:67600966-67600759 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 109, 86 |
| Conread position: | 301-498 |
| Cow position: | chr11:249317-249510 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 140, 59 |
| Conread position: | 301-499 |
| Cow position: | chr11:21843951-21844161 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 140 |
| Conread position: | 301-499 |
| Cow position: | chr11:51729462-51729257 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 302-496 |
| Cow position: | chr11:51195910-51196108 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 188 |
| Conread position: | 302-499 |
| Cow position: | chr11:21728102-21728305 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 302-499 |
| Cow position: | chr11:47899437-47899239 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 141, 87 |
| Conread position: | 302-499 |
| Cow position: | chr11:63866474-63866688 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 193 |
| Conread position: | 303-414 |
| Cow position: | chr11:49568050-49568161 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 303-499 |
| Cow position: | chr11:17721615-17721831 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 304-410 |
| Cow position: | chr11:54872576-54872684 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 304-423 |
| Cow position: | chr11:27907955-27907833 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 304-424 |
| Cow position: | chr11:83323762-83323638 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 304-445 |
| Cow position: | chr11:58186057-58185909 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 304-499 |
| Cow position: | chr11:38639284-38639083 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 189 |
| Conread position: | 305-439 |
| Cow position: | chr11:48246894-48247028 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 305-441 |
| Cow position: | chr11:48932405-48932537 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 305-483 |
| Cow position: | chr11:67948573-67948755 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 305-494 |
| Cow position: | chr11:1932304-1932516 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 305-499 |
| Cow position: | chr11:82740676-82740480 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 306-409 |
| Cow position: | chr11:10620109-10620212 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-410 |
| Cow position: | chr11:30986819-30986713 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 306-418 |
| Cow position: | chr11:36180626-36180511 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 306-496 |
| Cow position: | chr11:19500621-19500815 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 78, 166 |
| Conread position: | 306-498 |
| Cow position: | chr11:80819842-80820031 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 306-499 |
| Cow position: | chr11:18447318-18447521 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 112 |
| Conread position: | 309-410 |
| Cow position: | chr11:66104213-66104314 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-499 |
| Cow position: | chr11:71390396-71390590 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 318-498 |
| Cow position: | chr11:28993577-28993765 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 63, 182 |
| Conread position: | 326-499 |
| Cow position: | chr11:81162284-81162462 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 86 |
Show alignments to all cow chromosomes.