Cow genome map

Conread name: rhyp12c_f18.y1

Conread position: 272-496
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 274-409
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 281-398
Cow position:
Alignm length: 118
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 284-410
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 286-406
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 287-395
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 287-410
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 287-412
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 5

Conread position: 287-418
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 59

Conread position: 288-410
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 288-410
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 44

Conread position: 288-410
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 288-410
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 94, 23

Conread position: 288-410
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 23

Conread position: 288-482
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 92

Conread position: 288-498
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 110, 26

Conread position: 288-499
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 288-499
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 289-392
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 289-410
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 289-417
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 87

Conread position: 289-427
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 289-441
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 131

Conread position: 289-446
Cow position:
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 60

Conread position: 289-446
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 289-450
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 121, 0

Conread position: 289-484
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 289-484
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 49

Conread position: 289-492
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 78

Conread position: 289-499
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 48

Conread position: 289-499
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 290-383
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-413
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 82

Conread position: 290-499
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 291-389
Cow position:
Alignm length: 101
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 291-409
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 292-385
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 292-386
Cow position:
Alignm length: 95
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-410
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 292-410
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 292-410
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 51

Conread position: 292-410
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 292-415
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 292-417
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 292-441
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 292-446
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 113, 97

Conread position: 292-499
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 45

Conread position: 292-499
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 292-499
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 179

Conread position: 292-499
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 120, 102

Conread position: 292-499
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 51

Conread position: 292-499
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 151, 107

Conread position: 293-409
Cow position:
Alignm length: 119
Alignm identity: 103
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 293-410
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 293-417
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 293-439
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 293-494
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 293-499
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 63

Conread position: 293-499
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 293-499
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 157

Conread position: 293-499
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 97

Conread position: 293-499
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 207

Conread position: 294-383
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 294-392
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-407
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 294-417
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 43

Conread position: 294-443
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 294-446
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 43

Conread position: 294-484
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 294-495
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 294-497
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 82, 169

Conread position: 294-499
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 116, 90

Conread position: 294-499
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 83, 214

Conread position: 294-499
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 49

Conread position: 295-417
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 295-495
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 295-497
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 42

Conread position: 295-499
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 119

Conread position: 295-499
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 295-499
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 172

Conread position: 295-499
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 149, 43

Conread position: 295-499
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 296-410
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 296-497
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 296-499
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 167

Conread position: 297-409
Cow position:
Alignm length: 113
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 297-413
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 297-445
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 297-488
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 297-494
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 30

Conread position: 297-499
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 146, 69

Conread position: 298-404
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 298-410
Cow position:
Alignm length: 114
Alignm identity: 99
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 45, 97

Conread position: 298-447
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 298-499
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 76

Conread position: 299-383
Cow position:
Alignm length: 85
Alignm identity: 77
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 299-398
Cow position:
Alignm length: 100
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 299-499
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 38

Conread position: 299-499
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 0

Conread position: 300-410
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 300-410
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 38

Conread position: 300-434
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 301-408
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 301-425
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 36

Conread position: 301-434
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 301-495
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 109, 86

Conread position: 301-498
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 59

Conread position: 301-499
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 140

Conread position: 301-499
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 302-496
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 188

Conread position: 302-499
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 27

Conread position: 302-499
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 141, 87

Conread position: 302-499
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 193

Conread position: 303-414
Cow position:
Alignm length: 113
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 20

Conread position: 303-499
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 304-410
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 304-423
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 304-424
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 304-445
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 304-499
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 189

Conread position: 305-439
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 11

Conread position: 305-441
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 305-483
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 28

Conread position: 305-494
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 305-499
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 25

Conread position: 306-409
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-410
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 306-418
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 306-496
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 166

Conread position: 306-498
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 25

Conread position: 306-499
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 112

Conread position: 309-410
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 311-499
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 73

Conread position: 318-498
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 182

Conread position: 326-499
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 86

Show alignments to all cow chromosomes.