Cow genome map

Conread name: rhyp12c_f18.y1

Conread position: 262-498
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 277-499
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 180

Conread position: 278-382
Cow position:
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 280-382
Cow position:
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 282-499
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 181

Conread position: 283-480
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 286-441
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 61

Conread position: 286-488
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 51

Conread position: 286-499
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 49

Conread position: 287-410
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 287-410
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 287-496
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 196

Conread position: 287-499
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 287-499
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 125, 151

Conread position: 287-499
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 26

Conread position: 288-399
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 288-410
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 97

Conread position: 288-496
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 107, 25

Conread position: 289-375
Cow position:
Alignm length: 87
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-390
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-398
Cow position:
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-406
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-409
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 43

Conread position: 289-409
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 90

Conread position: 289-410
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 55

Conread position: 289-410
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 49

Conread position: 289-413
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 289-415
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 289-417
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 289-417
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 289-482
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 157

Conread position: 289-491
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 22

Conread position: 289-496
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 105, 121

Conread position: 289-498
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 58

Conread position: 289-498
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 289-499
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 289-499
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 153, 0

Conread position: 289-499
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 289-499
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 289-499
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 48

Conread position: 290-383
Cow position:
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 290-423
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 290-499
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 212

Conread position: 290-499
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 291-445
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 291-499
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 28

Conread position: 292-410
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 292-410
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 292-415
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 80

Conread position: 292-417
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 292-441
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 120

Conread position: 292-445
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 102

Conread position: 292-498
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 118

Conread position: 292-499
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 0

Conread position: 292-499
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 151, 21

Conread position: 292-499
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 147

Conread position: 293-410
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 293-410
Cow position:
Alignm length: 118
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 293-417
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 293-446
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 121

Conread position: 293-496
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 149, 84

Conread position: 293-499
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 61

Conread position: 293-499
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 46

Conread position: 293-499
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 294-398
Cow position:
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-418
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 99, 77

Conread position: 294-444
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 43

Conread position: 294-445
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 94

Conread position: 294-484
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 120

Conread position: 294-497
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 294-499
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 19

Conread position: 294-499
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 86, 128

Conread position: 295-477
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 145, 72

Conread position: 295-498
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 295-499
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 296-441
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 296-484
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 120

Conread position: 296-497
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 153

Conread position: 296-499
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 116, 0

Conread position: 297-383
Cow position:
Alignm length: 87
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 297-410
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 297-417
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 297-432
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 297-446
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 22

Conread position: 297-499
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 113, 87

Conread position: 298-446
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 298-491
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 203

Conread position: 298-497
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 33

Conread position: 299-445
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 299-446
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 111, 85

Conread position: 299-498
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 155

Conread position: 299-499
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 299-499
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 110

Conread position: 299-499
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 73

Conread position: 299-499
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 79, 44

Conread position: 299-499
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 300-499
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 142, 0

Conread position: 300-499
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 300-499
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 110, 96

Conread position: 300-499
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 83

Conread position: 300-499
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 121

Conread position: 300-499
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 301-386
Cow position:
Alignm length: 86
Alignm identity: 78
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 301-404
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 301-410
Cow position:
Alignm length: 110
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 301-410
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 301-489
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 301-499
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 58

Conread position: 301-499
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 113

Conread position: 301-499
Cow position:
Alignm length: 216
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 84, 46

Conread position: 302-407
Cow position:
Alignm length: 106
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 302-482
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 302-497
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 156

Conread position: 302-497
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 11

Conread position: 302-499
Cow position:
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 110

Conread position: 302-499
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 160

Conread position: 303-497
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 151

Conread position: 303-498
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 303-499
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 78, 36

Conread position: 304-410
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 304-499
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 39

Conread position: 304-499
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 304-499
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 68, 148

Conread position: 305-492
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 83

Conread position: 305-495
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 305-499
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 183

Conread position: 306-410
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 306-477
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 306-497
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 103

Conread position: 306-497
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 109

Conread position: 309-499
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 90

Conread position: 309-499
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 29

Conread position: 309-499
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 132

Conread position: 310-445
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 0

Conread position: 310-469
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 99

Conread position: 310-499
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 102, 167

Conread position: 310-499
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 55

Conread position: 310-499
Cow position:
Alignm length: 205
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 102, 79

Conread position: 311-410
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 311-499
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 35

Conread position: 311-499
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 312-446
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 131, 118

Conread position: 314-417
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 315-409
Cow position:
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 319-499
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 70

Show alignments to all cow chromosomes.