Cow genome map
| Conread name: | rhyp12c_f18.y1 |
| Conread position: | 239-488 |
| Cow position: | chr18:29065153-29065417 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 278-499 |
| Cow position: | chr18:10576297-10576060 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 280-410 |
| Cow position: | chr18:23258315-23258186 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 281-499 |
| Cow position: | chr18:20641307-20641541 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 283-417 |
| Cow position: | chr18:641125-641263 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 284-445 |
| Cow position: | chr18:18569166-18569004 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 284-499 |
| Cow position: | chr18:50359513-50359287 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 285-406 |
| Cow position: | chr18:42967291-42967174 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 285-409 |
| Cow position: | chr18:48158810-48158687 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 285-499 |
| Cow position: | chr18:2773200-2773437 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 285-499 |
| Cow position: | chr18:18592653-18592428 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 286-441 |
| Cow position: | chr18:29264179-29264339 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 97 |
| Conread position: | 286-496 |
| Cow position: | chr18:54130155-54130374 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 286-499 |
| Cow position: | chr18:4626604-4626830 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 178 |
| Conread position: | 287-405 |
| Cow position: | chr18:10214005-10214126 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 287-410 |
| Cow position: | chr18:4485781-4485658 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-499 |
| Cow position: | chr18:24719495-24719268 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 288-405 |
| Cow position: | chr18:12273839-12273722 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 288-441 |
| Cow position: | chr18:18596907-18597067 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 288-471 |
| Cow position: | chr18:21187486-21187291 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 191 |
| Conread position: | 288-482 |
| Cow position: | chr18:1735415-1735610 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 288-498 |
| Cow position: | chr18:31556973-31557204 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 199 |
| Conread position: | 288-499 |
| Cow position: | chr18:9558149-9557935 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 23 |
| Conread position: | 288-499 |
| Cow position: | chr18:48713728-48713506 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 289-383 |
| Cow position: | chr18:51178529-51178624 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 289-410 |
| Cow position: | chr18:21410870-21410744 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 289-410 |
| Cow position: | chr18:47680694-47680571 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 289-410 |
| Cow position: | chr18:47865251-47865128 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 289-410 |
| Cow position: | chr18:51398151-51398274 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 289-411 |
| Cow position: | chr18:55109427-55109553 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 289-417 |
| Cow position: | chr18:35827196-35827324 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 24 |
| Conread position: | 289-423 |
| Cow position: | chr18:30295425-30295561 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 289-437 |
| Cow position: | chr18:39860595-39860753 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 289-441 |
| Cow position: | chr18:29091911-29091754 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 289-498 |
| Cow position: | chr18:18844194-18843970 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 289-498 |
| Cow position: | chr18:42431909-42432136 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 289-498 |
| Cow position: | chr18:51405733-51405950 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 289-499 |
| Cow position: | chr18:29957998-29958209 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 31 |
| Conread position: | 289-499 |
| Cow position: | chr18:50632262-50632487 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 113 |
| Conread position: | 289-499 |
| Cow position: | chr18:50637310-50637516 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 154, 22 |
| Conread position: | 290-499 |
| Cow position: | chr18:9089873-9089655 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 290-499 |
| Cow position: | chr18:33300066-33299859 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 290-499 |
| Cow position: | chr18:44262805-44262586 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 130 |
| Conread position: | 291-404 |
| Cow position: | chr18:1954399-1954512 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 96, 69 |
| Conread position: | 291-483 |
| Cow position: | chr18:22789909-22790117 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 292-409 |
| Cow position: | chr18:11814479-11814364 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 292-410 |
| Cow position: | chr18:9010885-9010767 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-417 |
| Cow position: | chr18:45573561-45573430 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 292-482 |
| Cow position: | chr18:22180601-22180796 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 102 |
| Conread position: | 292-482 |
| Cow position: | chr18:49602862-49603071 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 292-492 |
| Cow position: | chr18:25598053-25598270 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 292-499 |
| Cow position: | chr18:2793796-2794016 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 95 |
| Conread position: | 292-499 |
| Cow position: | chr18:23630435-23630649 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 85, 164 |
| Conread position: | 292-499 |
| Cow position: | chr18:30586056-30586266 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 166 |
| Conread position: | 292-499 |
| Cow position: | chr18:41257737-41257947 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 89, 129 |
| Conread position: | 292-499 |
| Cow position: | chr18:43796778-43797000 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 292-499 |
| Cow position: | chr18:44917934-44917712 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 292-499 |
| Cow position: | chr18:52251673-52251902 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 293-408 |
| Cow position: | chr18:18722250-18722137 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 73 |
| Conread position: | 293-410 |
| Cow position: | chr18:11867517-11867399 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 103 |
| Conread position: | 293-410 |
| Cow position: | chr18:24835029-24834914 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 293-428 |
| Cow position: | chr18:23026849-23026982 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 293-445 |
| Cow position: | chr18:19849592-19849746 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 120 |
| Conread position: | 293-499 |
| Cow position: | chr18:1571060-1571280 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 293-499 |
| Cow position: | chr18:12117674-12117893 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 169 |
| Conread position: | 293-499 |
| Cow position: | chr18:31711398-31711609 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 153, 116 |
| Conread position: | 294-409 |
| Cow position: | chr18:11857074-11856961 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 294-437 |
| Cow position: | chr18:40356766-40356909 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 138, 115 |
| Conread position: | 294-499 |
| Cow position: | chr18:4884341-4884562 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 294-499 |
| Cow position: | chr18:11691228-11691453 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 294-499 |
| Cow position: | chr18:20126470-20126262 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 102 |
| Conread position: | 294-499 |
| Cow position: | chr18:20462529-20462740 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 84, 118 |
| Conread position: | 294-499 |
| Cow position: | chr18:50082103-50082302 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 149, 62 |
| Conread position: | 295-406 |
| Cow position: | chr18:5632442-5632331 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-410 |
| Cow position: | chr18:34444560-34444677 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 295-414 |
| Cow position: | chr18:45897904-45897785 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-490 |
| Cow position: | chr18:47801919-47802126 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 99, 148 |
| Conread position: | 295-499 |
| Cow position: | chr18:10905024-10904805 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 295-499 |
| Cow position: | chr18:55120044-55119827 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 297-498 |
| Cow position: | chr18:15516997-15517215 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 191 |
| Conread position: | 297-499 |
| Cow position: | chr18:9974155-9974373 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 297-499 |
| Cow position: | chr18:14225563-14225349 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 41 |
| Conread position: | 297-499 |
| Cow position: | chr18:47417176-47416957 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 298-499 |
| Cow position: | chr18:51594645-51594849 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 299-410 |
| Cow position: | chr18:35112134-35112246 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 299-446 |
| Cow position: | chr18:17974796-17974640 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 14 |
| Conread position: | 299-451 |
| Cow position: | chr18:20226296-20226138 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 299-478 |
| Cow position: | chr18:50004533-50004726 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 163 |
| Conread position: | 299-499 |
| Cow position: | chr18:10977042-10977255 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 300-407 |
| Cow position: | chr18:5072245-5072348 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 300-410 |
| Cow position: | chr18:12026686-12026574 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 300-410 |
| Cow position: | chr18:30247833-30247945 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 300-491 |
| Cow position: | chr18:8170919-8171122 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 300-495 |
| Cow position: | chr18:39662953-39662738 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 300-499 |
| Cow position: | chr18:1399180-1399395 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 80, 187 |
| Conread position: | 300-499 |
| Cow position: | chr18:38806739-38806541 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 60 |
| Conread position: | 301-409 |
| Cow position: | chr18:12023468-12023578 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 301-424 |
| Cow position: | chr18:12059165-12059044 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 301-440 |
| Cow position: | chr18:47868767-47868622 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 301-441 |
| Cow position: | chr18:48825905-48826044 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 111 |
| Conread position: | 301-446 |
| Cow position: | chr18:51301918-51302063 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 98 |
| Conread position: | 301-497 |
| Cow position: | chr18:9846247-9846453 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 301-498 |
| Cow position: | chr18:51383227-51383439 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 205 |
| Conread position: | 301-499 |
| Cow position: | chr18:45558314-45558102 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 111, 85 |
| Conread position: | 302-413 |
| Cow position: | chr18:49441013-49440897 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 302-489 |
| Cow position: | chr18:32243570-32243763 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 302-495 |
| Cow position: | chr18:47824604-47824810 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 155 |
| Conread position: | 302-499 |
| Cow position: | chr18:5578465-5578264 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 109, 87 |
| Conread position: | 302-499 |
| Cow position: | chr18:38937990-38937777 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 204 |
| Conread position: | 302-499 |
| Cow position: | chr18:49981288-49981484 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 141, 58 |
| Conread position: | 302-499 |
| Cow position: | chr18:50095239-50095443 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 303-410 |
| Cow position: | chr18:18520632-18520742 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 303-446 |
| Cow position: | chr18:12056525-12056670 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 303-484 |
| Cow position: | chr18:35581885-35582068 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 140, 10 |
| Conread position: | 303-499 |
| Cow position: | chr18:1144023-1144228 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 303-499 |
| Cow position: | chr18:25006335-25006538 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 304-406 |
| Cow position: | chr18:33364378-33364276 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-498 |
| Cow position: | chr18:38985859-38985649 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 305-499 |
| Cow position: | chr18:2146425-2146624 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 305-499 |
| Cow position: | chr18:32189351-32189552 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 306-498 |
| Cow position: | chr18:49100219-49100412 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 137, 83 |
| Conread position: | 307-410 |
| Cow position: | chr18:1151782-1151887 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 307-499 |
| Cow position: | chr18:5647973-5647768 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 102, 78 |
| Conread position: | 307-499 |
| Cow position: | chr18:15809646-15809845 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 111 |
| Conread position: | 310-499 |
| Cow position: | chr18:47183151-47183338 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 311-499 |
| Cow position: | chr18:35367044-35367237 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 27 |
| Conread position: | 311-499 |
| Cow position: | chr18:49015277-49015084 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 316-499 |
| Cow position: | chr18:19296031-19295843 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 317-410 |
| Cow position: | chr18:44548591-44548687 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 317-495 |
| Cow position: | chr18:40047349-40047539 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 323-499 |
| Cow position: | chr18:39001665-39001848 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 138 |
| Conread position: | 325-478 |
| Cow position: | chr18:43125224-43125062 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.