Cow genome map


           Conread name:
           rhyp12c_f18.y1
        

               Conread position:
               245-483
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               282-410
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               92, 114
               

               Conread position:
               283-485
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 40
               

               Conread position:
               283-499
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               286-499
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               287-406
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               287-437
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               105, 123
               

               Conread position:
               287-499
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               89, 154
               

               Conread position:
               287-499
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               288-407
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               288-412
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-471
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               288-498
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               288-499
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               124, 108
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               289-415
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               289-439
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               98, 30
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               83, 123
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               97, 157
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               290-385
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               290-410
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               290-485
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 199
               

               Conread position:
               292-403
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 58
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 153
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               87, 120
               

               Conread position:
               293-406
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               293-410
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               293-417
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               293-499
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               294-498
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               94, 70
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               117, 92
               

               Conread position:
               296-446
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 81
               

               Conread position:
               296-485
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 135
               

               Conread position:
               296-494
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               296-499
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               147, 88
               

               Conread position:
               297-410
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               297-410
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               299-443
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               299-483
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               144, 51
               

               Conread position:
               299-492
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               132, 30
               

               Conread position:
               299-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               113, 200
               

               Conread position:
               299-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               300-410
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               300-417
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               300-481
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               300-499
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               301-393
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-413
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               301-499
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               75, 144
               

               Conread position:
               301-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               83, 97
               

               Conread position:
               301-499
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               302-404
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               302-498
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               10, 107
               

               Conread position:
               303-407
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               303-415
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               303-499
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               304-413
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               305-445
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 58
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               107, 90
               

               Conread position:
               306-409
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               306-496
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               307-495
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               307-499
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 71
               

               Conread position:
               309-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 45
               

               Conread position:
               310-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               311-498
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               321-499
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 128
               
Show alignments to all cow chromosomes.