Cow genome map


           Conread name:
           rhyp12c_f18.y1
        

               Conread position:
               282-482
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               159, 29
               

               Conread position:
               284-410
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               285-499
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               125, 24
               

               Conread position:
               286-410
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               286-423
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               287-495
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 29
               

               Conread position:
               287-499
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               287-499
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               288-410
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               288-410
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               288-494
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               288-496
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               288-498
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               91, 210
               

               Conread position:
               288-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               288-499
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 126
               

               Conread position:
               289-398
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               289-487
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               91, 125
               

               Conread position:
               290-483
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               291-403
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               291-441
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 131
               

               Conread position:
               291-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 46
               

               Conread position:
               292-408
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               292-408
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               292-410
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               292-410
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               292-478
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 147
               

               Conread position:
               292-497
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               292-498
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               92, 125
               

               Conread position:
               293-410
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               293-499
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               293-499
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               293-499
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               114, 42
               

               Conread position:
               294-441
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               294-445
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               294-478
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               85, 141
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               117, 43
               

               Conread position:
               295-408
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-499
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               296-446
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               296-495
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               296-498
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               146, 75
               

               Conread position:
               297-402
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               297-410
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 48
               

               Conread position:
               297-410
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               297-417
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 122
               

               Conread position:
               298-410
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               298-492
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               145, 113
               

               Conread position:
               298-493
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               52, 47
               

               Conread position:
               298-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               63, 166
               

               Conread position:
               299-386
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               300-410
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               301-451
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               142, 55
               

               Conread position:
               301-493
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               302-433
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               302-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               302-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 182
               

               Conread position:
               303-412
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               303-498
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 34
               

               Conread position:
               303-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               303-499
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               304-410
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               304-417
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               304-498
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               75, 56
               

               Conread position:
               304-498
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 115
               

               Conread position:
               305-436
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               138, 84
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               306-414
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               306-486
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               92, 105
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               104, 76
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               74, 109
               

               Conread position:
               310-499
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               310-499
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               310-499
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               318-497
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               323-488
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               75, 88
               

               Conread position:
               335-495
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               339-496
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 60
               
Show alignments to all cow chromosomes.