Cow genome map
Conread name: | rhyp12c_f18.y1 |
Conread position: | 275-424 |
Cow position: | chr27:29399336-29399485 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 127, 34 |
Conread position: | 280-495 |
Cow position: | chr27:31210282-31210511 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 171 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 99, 31 |
Conread position: | 282-487 |
Cow position: | chr27:13204198-13204415 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 130, 96 |
Conread position: | 282-499 |
Cow position: | chr27:7343695-7343460 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 175 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 96, 54 |
Conread position: | 284-415 |
Cow position: | chr27:13181638-13181776 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 20, 56 |
Conread position: | 287-383 |
Cow position: | chr27:23504501-23504405 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 80 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 287-410 |
Cow position: | chr27:15669036-15668907 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 287-491 |
Cow position: | chr27:19576585-19576363 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 288-406 |
Cow position: | chr27:25000227-25000111 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 288-417 |
Cow position: | chr27:11982908-11982772 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 92, 23 |
Conread position: | 288-498 |
Cow position: | chr27:15315262-15315484 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 159 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 118, 52 |
Conread position: | 288-499 |
Cow position: | chr27:23560289-23560063 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 95, 23 |
Conread position: | 289-392 |
Cow position: | chr27:24320808-24320911 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-406 |
Cow position: | chr27:15867133-15867250 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-411 |
Cow position: | chr27:1193563-1193441 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 94 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 289-462 |
Cow position: | chr27:6151054-6151229 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 105, 121 |
Conread position: | 289-485 |
Cow position: | chr27:11133826-11134040 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 161 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 289-494 |
Cow position: | chr27:20888474-20888683 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 14, 122 |
Conread position: | 289-496 |
Cow position: | chr27:16103550-16103772 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 18, 175 |
Conread position: | 289-498 |
Cow position: | chr27:6162663-6162443 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 152 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 289-499 |
Cow position: | chr27:17397711-17397486 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 171 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 289-499 |
Cow position: | chr27:22035631-22035409 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 289-499 |
Cow position: | chr27:31556835-31557045 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 105, 22 |
Conread position: | 290-404 |
Cow position: | chr27:14675431-14675317 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 290-497 |
Cow position: | chr27:14343694-14343489 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 96, 56 |
Conread position: | 291-499 |
Cow position: | chr27:15453955-15454176 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 87, 49 |
Conread position: | 292-410 |
Cow position: | chr27:24952209-24952090 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 100 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 88, 51 |
Conread position: | 292-478 |
Cow position: | chr27:16047744-16047551 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 141 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 292-493 |
Cow position: | chr27:16284232-16284437 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 156 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 88, 77 |
Conread position: | 292-499 |
Cow position: | chr27:4944763-4944546 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 161 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 292-499 |
Cow position: | chr27:19387764-19387986 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 167 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 95, 47 |
Conread position: | 292-499 |
Cow position: | chr27:22220293-22220522 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 169 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 293-386 |
Cow position: | chr27:18767338-18767245 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 80 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 293-410 |
Cow position: | chr27:27450139-27450021 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 293-479 |
Cow position: | chr27:10394714-10394900 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 136 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 150, 94 |
Conread position: | 293-495 |
Cow position: | chr27:20897276-20897061 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 87, 169 |
Conread position: | 293-499 |
Cow position: | chr27:20093069-20092866 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 150, 89 |
Conread position: | 294-408 |
Cow position: | chr27:23527754-23527639 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 294-409 |
Cow position: | chr27:28192867-28192752 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 95 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 49, 31 |
Conread position: | 294-499 |
Cow position: | chr27:18435385-18435165 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 164 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 294-499 |
Cow position: | chr27:24223700-24223922 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 164 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 83, 43 |
Conread position: | 294-499 |
Cow position: | chr27:26617160-26617374 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 153 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 94, 44 |
Conread position: | 294-499 |
Cow position: | chr27:30890046-30890259 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 154 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 87, 122 |
Conread position: | 295-383 |
Cow position: | chr27:7212984-7212896 (view UCSC Genome Browser custom track) |
Alignm length: | 89 |
Alignm identity: | 79 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 295-411 |
Cow position: | chr27:12284740-12284862 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 295-414 |
Cow position: | chr27:26315394-26315273 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 295-437 |
Cow position: | chr27:21448076-21447926 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 91, 124 |
Conread position: | 295-499 |
Cow position: | chr27:29504884-29504681 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 143 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 148, 79 |
Conread position: | 296-410 |
Cow position: | chr27:22150946-22150830 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 296-410 |
Cow position: | chr27:29614789-29614906 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 296-499 |
Cow position: | chr27:20828957-20828742 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 155 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 94, 41 |
Conread position: | 297-499 |
Cow position: | chr27:7425440-7425220 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 157 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 297-499 |
Cow position: | chr27:8353243-8353444 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 33, 93 |
Conread position: | 297-499 |
Cow position: | chr27:15409277-15409068 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 156 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 76, 117 |
Conread position: | 298-410 |
Cow position: | chr27:22102892-22102778 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 298-410 |
Cow position: | chr27:30884987-30885102 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 299-445 |
Cow position: | chr27:4411941-4411795 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 83, 91 |
Conread position: | 300-406 |
Cow position: | chr27:31248855-31248749 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 88 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 300-410 |
Cow position: | chr27:28062443-28062334 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 300-499 |
Cow position: | chr27:426721-426937 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 300-499 |
Cow position: | chr27:22171053-22171265 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 82, 71 |
Conread position: | 301-382 |
Cow position: | chr27:18749168-18749087 (view UCSC Genome Browser custom track) |
Alignm length: | 82 |
Alignm identity: | 73 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 301-499 |
Cow position: | chr27:28206556-28206767 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 151 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 86, 179 |
Conread position: | 302-406 |
Cow position: | chr27:26939831-26939937 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 302-472 |
Cow position: | chr27:23918281-23918101 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 302-488 |
Cow position: | chr27:19741638-19741451 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 140, 87 |
Conread position: | 303-456 |
Cow position: | chr27:20283398-20283561 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 126 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 98, 71 |
Conread position: | 303-497 |
Cow position: | chr27:7412148-7412359 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 303-499 |
Cow position: | chr27:16705007-16705219 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 304-499 |
Cow position: | chr27:4858863-4858671 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 103, 12 |
Conread position: | 305-406 |
Cow position: | chr27:20048392-20048494 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 305-499 |
Cow position: | chr27:6319679-6319887 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 82, 68 |
Conread position: | 305-499 |
Cow position: | chr27:22225813-22225627 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 137 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 138, 68 |
Conread position: | 306-410 |
Cow position: | chr27:178620-178727 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 90 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 306-417 |
Cow position: | chr27:16505149-16505037 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 96, 61 |
Conread position: | 306-495 |
Cow position: | chr27:24693175-24693377 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 149 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 106, 140 |
Conread position: | 306-499 |
Cow position: | chr27:27055053-27055254 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 80, 113 |
Conread position: | 307-441 |
Cow position: | chr27:22386646-22386782 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 309-493 |
Cow position: | chr27:17102660-17102858 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 143 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 310-497 |
Cow position: | chr27:299613-299415 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 68, 54 |
Conread position: | 311-499 |
Cow position: | chr27:27613836-27613651 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 142 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 102, 73 |
Conread position: | 313-499 |
Cow position: | chr27:26865344-26865150 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 63, 142 |
Show alignments to all cow chromosomes.