Cow genome map


           Conread name:
           rhyp12c_f18.y1
        

               Conread position:
               275-424
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               280-495
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               99, 31
               

               Conread position:
               282-487
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 96
               

               Conread position:
               282-499
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               96, 54
               

               Conread position:
               284-415
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               287-383
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               287-410
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               287-491
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               288-406
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               288-417
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               288-498
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               118, 52
               

               Conread position:
               288-499
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               289-392
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-406
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-411
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-462
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               105, 121
               

               Conread position:
               289-485
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               289-494
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 122
               

               Conread position:
               289-496
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 175
               

               Conread position:
               289-498
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               290-404
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               290-497
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               291-499
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 49
               

               Conread position:
               292-410
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 51
               

               Conread position:
               292-478
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               292-493
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 77
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               293-386
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-410
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               293-479
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               150, 94
               

               Conread position:
               293-495
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 169
               

               Conread position:
               293-499
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               150, 89
               

               Conread position:
               294-408
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               294-409
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               87, 122
               

               Conread position:
               295-383
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               79
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-411
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               295-414
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               295-437
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               91, 124
               

               Conread position:
               295-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               148, 79
               

               Conread position:
               296-410
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               296-410
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               296-499
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               298-410
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               298-410
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               299-445
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 91
               

               Conread position:
               300-406
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               300-410
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               300-499
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               300-499
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               301-382
               

               Cow position:
               
               

               Alignm length:
               82
               

               Alignm identity:
               73
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               86, 179
               

               Conread position:
               302-406
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               302-472
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               302-488
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 87
               

               Conread position:
               303-456
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               303-497
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               303-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               304-499
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               305-406
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               138, 68
               

               Conread position:
               306-410
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               306-417
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               306-495
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               106, 140
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               307-441
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               309-493
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               310-497
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 54
               

               Conread position:
               311-499
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 73
               

               Conread position:
               313-499
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 142
               
Show alignments to all cow chromosomes.