Cow genome map


           Conread name:
           rhyp12c_f18.y1
        

               Conread position:
               257-417
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               262-495
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               269-499
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               174, 57
               

               Conread position:
               269-499
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               284-446
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               159, 27
               

               Conread position:
               285-398
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               286-445
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               287-408
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               287-456
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               94, 132
               

               Conread position:
               288-410
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               288-441
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               288-499
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               121, 52
               

               Conread position:
               289-407
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               289-409
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               289-409
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-410
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               289-445
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               289-497
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               33, 213
               

               Conread position:
               289-498
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               89, 173
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               25, 125
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               289-499
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               290-380
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               78
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               290-410
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               290-499
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 84
               

               Conread position:
               292-385
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-410
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               292-410
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               292-410
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               96, 69
               

               Conread position:
               292-445
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               292-446
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 99
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               118, 181
               

               Conread position:
               292-499
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               293-410
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               293-489
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               294-415
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               294-422
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               149, 82
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               294-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               295-398
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-417
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               296-499
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               297-410
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               297-499
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               298-410
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               298-413
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               299-433
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 117
               

               Conread position:
               299-495
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               299-498
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               69, 47
               

               Conread position:
               300-499
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               301-484
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 88
               

               Conread position:
               302-499
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               303-409
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               303-417
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               303-496
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               303-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 119
               

               Conread position:
               304-410
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 92
               

               Conread position:
               304-498
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 80
               

               Conread position:
               304-499
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               304-499
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               101, 145
               

               Conread position:
               305-434
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               76, 110
               

               Conread position:
               305-499
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 72
               

               Conread position:
               306-405
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               306-473
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               306-494
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               137, 85
               

               Conread position:
               306-495
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               306-499
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 164
               

               Conread position:
               307-420
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               310-408
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               81
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-499
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               312-499
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               316-499
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 99
               

               Conread position:
               317-499
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 113
               

               Conread position:
               323-498
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               323-499
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               120, 0
               
Show alignments to all cow chromosomes.