Cow genome map
| Conread name: | rhyp12c_f18.y1 |
| Conread position: | 262-446 |
| Cow position: | chr4:65291629-65291820 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 264-499 |
| Cow position: | chr4:38209740-38209994 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 276-498 |
| Cow position: | chr4:63471870-63472093 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 135, 35 |
| Conread position: | 279-499 |
| Cow position: | chr4:61897333-61897554 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 280-392 |
| Cow position: | chr4:64336057-64336174 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 282-392 |
| Cow position: | chr4:46061163-46061053 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 282-409 |
| Cow position: | chr4:10785923-10786055 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 284-441 |
| Cow position: | chr4:56395730-56395554 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 284-499 |
| Cow position: | chr4:51851423-51851187 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 8 |
| Conread position: | 285-410 |
| Cow position: | chr4:42608951-42608823 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 285-499 |
| Cow position: | chr4:17774150-17774369 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 285-499 |
| Cow position: | chr4:64029305-64029098 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 158, 100 |
| Conread position: | 286-499 |
| Cow position: | chr4:35982211-35981977 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 287-405 |
| Cow position: | chr4:49338250-49338131 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 287-409 |
| Cow position: | chr4:66172585-66172705 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 287-413 |
| Cow position: | chr4:6202194-6202322 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 287-441 |
| Cow position: | chr4:27657182-27657018 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 124, 102 |
| Conread position: | 287-499 |
| Cow position: | chr4:25227144-25226930 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 114, 97 |
| Conread position: | 287-499 |
| Cow position: | chr4:46049807-46050019 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 288-392 |
| Cow position: | chr4:26768033-26767928 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 288-395 |
| Cow position: | chr4:31676981-31677088 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 288-403 |
| Cow position: | chr4:20315286-20315400 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 288-410 |
| Cow position: | chr4:19328791-19328668 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 288-410 |
| Cow position: | chr4:45387030-45386906 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 288-413 |
| Cow position: | chr4:67467186-67467059 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 89, 22 |
| Conread position: | 288-439 |
| Cow position: | chr4:3299590-3299747 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 119, 23 |
| Conread position: | 288-471 |
| Cow position: | chr4:54500835-54501014 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 88 |
| Conread position: | 288-499 |
| Cow position: | chr4:20026896-20027122 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 288-499 |
| Cow position: | chr4:21506755-21506975 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 289-385 |
| Cow position: | chr4:50494987-50494891 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-404 |
| Cow position: | chr4:61193137-61193251 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 289-406 |
| Cow position: | chr4:58018550-58018434 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 289-410 |
| Cow position: | chr4:12867308-12867188 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 289-410 |
| Cow position: | chr4:19496770-19496896 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 289-410 |
| Cow position: | chr4:30944165-30944039 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 289-410 |
| Cow position: | chr4:34544515-34544391 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 78 |
| Conread position: | 289-410 |
| Cow position: | chr4:40393019-40392900 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 289-417 |
| Cow position: | chr4:31178030-31177900 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 289-417 |
| Cow position: | chr4:36876648-36876783 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 289-422 |
| Cow position: | chr4:45629835-45629976 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 289-479 |
| Cow position: | chr4:3519627-3519419 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 289-482 |
| Cow position: | chr4:56410553-56410343 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 289-483 |
| Cow position: | chr4:37991797-37991589 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 174 |
| Conread position: | 289-487 |
| Cow position: | chr4:33360301-33360099 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 289-494 |
| Cow position: | chr4:49212542-49212754 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 289-496 |
| Cow position: | chr4:19119228-19119001 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 289-499 |
| Cow position: | chr4:22546635-22546860 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 289-499 |
| Cow position: | chr4:23846846-23847068 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 121, 190 |
| Conread position: | 289-499 |
| Cow position: | chr4:29291714-29291497 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 186 |
| Conread position: | 289-499 |
| Cow position: | chr4:40414417-40414647 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 289-499 |
| Cow position: | chr4:44772830-44773062 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 289-499 |
| Cow position: | chr4:60527388-60527161 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 290-455 |
| Cow position: | chr4:4320786-4320964 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 290-492 |
| Cow position: | chr4:85900-85682 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 290-493 |
| Cow position: | chr4:28839817-28839608 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 96, 166 |
| Conread position: | 290-499 |
| Cow position: | chr4:12049431-12049228 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 290-499 |
| Cow position: | chr4:48152165-48152390 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 291-410 |
| Cow position: | chr4:22215305-22215426 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 291-417 |
| Cow position: | chr4:49424993-49424864 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 291-445 |
| Cow position: | chr4:5805-5653 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 292-404 |
| Cow position: | chr4:22137915-22138027 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-410 |
| Cow position: | chr4:4084903-4085026 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 292-435 |
| Cow position: | chr4:39340466-39340322 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 292-441 |
| Cow position: | chr4:21088663-21088825 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 292-446 |
| Cow position: | chr4:19558872-19558721 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 151, 76 |
| Conread position: | 292-446 |
| Cow position: | chr4:23646662-23646822 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 292-483 |
| Cow position: | chr4:30769238-30769032 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 19, 151 |
| Conread position: | 292-498 |
| Cow position: | chr4:21161310-21161087 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 100, 92 |
| Conread position: | 292-499 |
| Cow position: | chr4:8182429-8182659 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 292-499 |
| Cow position: | chr4:28771865-28772086 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 292-499 |
| Cow position: | chr4:44903489-44903275 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 70 |
| Conread position: | 292-499 |
| Cow position: | chr4:47305286-47305058 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 292-499 |
| Cow position: | chr4:68806208-68805993 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 124 |
| Conread position: | 293-383 |
| Cow position: | chr4:19542354-19542264 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-417 |
| Cow position: | chr4:59785524-59785398 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 293-482 |
| Cow position: | chr4:9269694-9269889 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 293-499 |
| Cow position: | chr4:4084253-4084469 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 80, 124 |
| Conread position: | 293-499 |
| Cow position: | chr4:65463309-65463520 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 119, 91 |
| Conread position: | 294-402 |
| Cow position: | chr4:2736064-2736172 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-410 |
| Cow position: | chr4:12666234-12666115 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 294-445 |
| Cow position: | chr4:49794853-49794696 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 294-499 |
| Cow position: | chr4:10558739-10558517 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 294-499 |
| Cow position: | chr4:20327520-20327728 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 90, 29 |
| Conread position: | 295-498 |
| Cow position: | chr4:18098859-18099080 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 295-499 |
| Cow position: | chr4:961463-961670 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 295-499 |
| Cow position: | chr4:3688131-3687903 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 295-499 |
| Cow position: | chr4:10962382-10962587 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 92 |
| Conread position: | 296-408 |
| Cow position: | chr4:299351-299235 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 296-446 |
| Cow position: | chr4:28660345-28660515 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 296-497 |
| Cow position: | chr4:13344737-13344521 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 296-499 |
| Cow position: | chr4:275645-275444 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 120 |
| Conread position: | 296-499 |
| Cow position: | chr4:14504847-14505038 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 296-499 |
| Cow position: | chr4:20184884-20184688 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 147, 39 |
| Conread position: | 296-499 |
| Cow position: | chr4:50687664-50687880 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 297-408 |
| Cow position: | chr4:19700307-19700194 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 297-409 |
| Cow position: | chr4:46656335-46656225 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 91 |
| Conread position: | 297-410 |
| Cow position: | chr4:22701612-22701725 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 297-410 |
| Cow position: | chr4:54785730-54785844 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 297-498 |
| Cow position: | chr4:60719292-60719083 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 298-385 |
| Cow position: | chr4:11961665-11961578 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-410 |
| Cow position: | chr4:12908568-12908458 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 298-410 |
| Cow position: | chr4:30691201-30691088 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-498 |
| Cow position: | chr4:29384042-29384250 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 299-437 |
| Cow position: | chr4:60302817-60302961 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 299-445 |
| Cow position: | chr4:51617798-51617962 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 299-495 |
| Cow position: | chr4:13693476-13693687 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 299-499 |
| Cow position: | chr4:51728272-51728058 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 113, 86 |
| Conread position: | 300-409 |
| Cow position: | chr4:68358523-68358416 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 300-410 |
| Cow position: | chr4:12052140-12052247 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 300-410 |
| Cow position: | chr4:19504119-19504013 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 300-449 |
| Cow position: | chr4:66509823-66509670 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 300-499 |
| Cow position: | chr4:25370291-25370094 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 140 |
| Conread position: | 300-499 |
| Cow position: | chr4:31136952-31136737 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 300-499 |
| Cow position: | chr4:53208481-53208274 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 301-471 |
| Cow position: | chr4:28854080-28854263 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 87, 28 |
| Conread position: | 301-490 |
| Cow position: | chr4:32789820-32790013 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 301-499 |
| Cow position: | chr4:20141792-20141985 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 301-499 |
| Cow position: | chr4:21874374-21874156 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 301-499 |
| Cow position: | chr4:25356134-25356337 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 301-499 |
| Cow position: | chr4:38935554-38935340 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 302-445 |
| Cow position: | chr4:59608001-59608148 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 111 |
| Conread position: | 302-498 |
| Cow position: | chr4:34699849-34700048 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 163 |
| Conread position: | 302-499 |
| Cow position: | chr4:34510024-34509821 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 303-446 |
| Cow position: | chr4:34919080-34919234 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 303-483 |
| Cow position: | chr4:32602020-32601834 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 304-410 |
| Cow position: | chr4:51026544-51026435 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 304-494 |
| Cow position: | chr4:26659493-26659285 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 304-495 |
| Cow position: | chr4:21065218-21065021 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 305-417 |
| Cow position: | chr4:45076887-45077001 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 305-439 |
| Cow position: | chr4:69478420-69478283 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 305-445 |
| Cow position: | chr4:21128314-21128172 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 35 |
| Conread position: | 305-499 |
| Cow position: | chr4:5728023-5727825 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 305-499 |
| Cow position: | chr4:65173294-65173083 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 306-488 |
| Cow position: | chr4:51083149-51083345 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 96 |
| Conread position: | 306-499 |
| Cow position: | chr4:4150230-4150035 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 306-499 |
| Cow position: | chr4:21531449-21531662 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 306-499 |
| Cow position: | chr4:68889388-68889580 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 17 |
| Conread position: | 307-499 |
| Cow position: | chr4:4318964-4319171 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 307-499 |
| Cow position: | chr4:36517309-36517498 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 136, 82 |
| Conread position: | 307-499 |
| Cow position: | chr4:48486186-48485975 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 309-499 |
| Cow position: | chr4:3421812-3421603 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 310-494 |
| Cow position: | chr4:41907395-41907596 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 310-498 |
| Cow position: | chr4:17186161-17186367 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 175 |
| Conread position: | 310-499 |
| Cow position: | chr4:3283267-3283466 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 310-499 |
| Cow position: | chr4:37915151-37915354 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 102, 176 |
| Conread position: | 310-499 |
| Cow position: | chr4:48409098-48409287 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 133, 79 |
| Conread position: | 311-499 |
| Cow position: | chr4:33838617-33838819 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 152 |
| Conread position: | 316-499 |
| Cow position: | chr4:34653694-34653888 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 323-499 |
| Cow position: | chr4:48423042-48422858 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 39 |
| Conread position: | 336-494 |
| Cow position: | chr4:44449360-44449520 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 77 |
Show alignments to all cow chromosomes.