Cow genome map

Conread name: rhyp12c_f18.y1

Conread position: 267-410
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 14

Conread position: 279-446
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 283-499
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 89, 6

Conread position: 285-499
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 26

Conread position: 286-410
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 74

Conread position: 286-410
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 286-441
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 22

Conread position: 286-485
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 197

Conread position: 287-408
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 287-410
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 85

Conread position: 287-413
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 288-406
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 288-442
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 55

Conread position: 288-499
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 185

Conread position: 289-380
Cow position:
Alignm length: 92
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 289-386
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-392
Cow position:
Alignm length: 105
Alignm identity: 89
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 289-398
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-406
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 289-407
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 289-408
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 22

Conread position: 289-410
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 289-410
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 289-410
Cow position:
Alignm length: 126
Alignm identity: 106
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 289-416
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 289-438
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 28

Conread position: 289-482
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 112

Conread position: 289-489
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 118, 80

Conread position: 289-494
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 22

Conread position: 289-496
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 289-499
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 90, 125

Conread position: 289-499
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 161

Conread position: 289-499
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 121, 96

Conread position: 289-499
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 180

Conread position: 289-499
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 289-499
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 289-499
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 54

Conread position: 290-406
Cow position:
Alignm length: 120
Alignm identity: 100
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 290-407
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 290-409
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 290-441
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 290-499
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 291-409
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 42

Conread position: 291-494
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 72

Conread position: 291-499
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 292-399
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-410
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 22

Conread position: 292-486
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 292-499
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 45

Conread position: 292-499
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 96, 69

Conread position: 292-499
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 293-410
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 293-410
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 293-418
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 293-479
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 293-498
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 293-498
Cow position:
Alignm length: 224
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 26

Conread position: 294-392
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 294-410
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 294-446
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 294-477
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 294-495
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 294-495
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 294-498
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 59

Conread position: 295-446
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 91

Conread position: 295-446
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 117, 92

Conread position: 295-499
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 19

Conread position: 295-499
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 93, 168

Conread position: 296-410
Cow position:
Alignm length: 117
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 296-441
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 296-498
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 100

Conread position: 296-499
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 179

Conread position: 296-499
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 296-499
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 17

Conread position: 297-392
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 297-410
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 16

Conread position: 298-410
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 298-432
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 298-495
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 42

Conread position: 298-499
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 116, 44

Conread position: 298-499
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 100, 113

Conread position: 298-499
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 82, 98

Conread position: 299-409
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 299-410
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 299-445
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 299-446
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 41

Conread position: 299-495
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 299-499
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 112, 88

Conread position: 299-499
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 41

Conread position: 299-499
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 62

Conread position: 299-499
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 66

Conread position: 300-410
Cow position:
Alignm length: 111
Alignm identity: 96
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 300-497
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 300-499
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 96

Conread position: 300-499
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 301-410
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 301-417
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 301-499
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 302-496
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 302-498
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 38

Conread position: 303-408
Cow position:
Alignm length: 108
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 33

Conread position: 303-409
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 303-409
Cow position:
Alignm length: 107
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 303-410
Cow position:
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 303-446
Cow position:
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 303-462
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 73

Conread position: 303-462
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 73

Conread position: 303-499
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 303-499
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 304-499
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 86, 129

Conread position: 304-499
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 139, 56

Conread position: 304-499
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 304-499
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 157

Conread position: 304-499
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 110

Conread position: 305-406
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 305-446
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 8

Conread position: 305-489
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 305-499
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 111

Conread position: 306-409
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 306-410
Cow position:
Alignm length: 111
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 306-487
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 73, 158

Conread position: 306-499
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 72

Conread position: 306-499
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 306-499
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 306-499
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 106, 93

Conread position: 306-499
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 307-499
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 26

Conread position: 307-499
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 309-413
Cow position:
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 10

Conread position: 309-488
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 73

Conread position: 310-499
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 310-499
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 310-499
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 310-499
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 109

Conread position: 311-441
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 317-499
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 319-499
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 83

Conread position: 323-499
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 120, 14

Conread position: 340-499
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 73

Show alignments to all cow chromosomes.