Cow genome map
| Conread name: | rhyp12c_f18.y1 |
| Conread position: | 243-495 |
| Cow position: | chrX:31744724-31744986 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 269-499 |
| Cow position: | chrX:2523436-2523667 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 174, 42 |
| Conread position: | 270-499 |
| Cow position: | chrX:32910363-32910119 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 276-498 |
| Cow position: | chrX:42480088-42479849 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 281-406 |
| Cow position: | chrX:16763676-16763802 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 284-445 |
| Cow position: | chrX:39488958-39489120 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 285-499 |
| Cow position: | chrX:8869154-8869387 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 286-410 |
| Cow position: | chrX:40556213-40556339 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 286-483 |
| Cow position: | chrX:41858636-41858850 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 286-498 |
| Cow position: | chrX:17662372-17662579 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 286-499 |
| Cow position: | chrX:6414280-6414062 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 102, 51 |
| Conread position: | 287-392 |
| Cow position: | chrX:38726183-38726078 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-446 |
| Cow position: | chrX:41215571-41215392 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 287-497 |
| Cow position: | chrX:10959169-10959378 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 81, 97 |
| Conread position: | 287-499 |
| Cow position: | chrX:11656327-11656096 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 287-499 |
| Cow position: | chrX:19469268-19469491 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 287-499 |
| Cow position: | chrX:34504808-34505034 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 287-499 |
| Cow position: | chrX:39290602-39290374 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 194 |
| Conread position: | 287-499 |
| Cow position: | chrX:42246934-42247167 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 287-499 |
| Cow position: | chrX:45429785-45430007 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 288-410 |
| Cow position: | chrX:46910054-46909934 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 288-494 |
| Cow position: | chrX:20340410-20340623 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 288-499 |
| Cow position: | chrX:12972924-12972696 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 123, 100 |
| Conread position: | 288-499 |
| Cow position: | chrX:27145845-27145619 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 288-499 |
| Cow position: | chrX:27431678-27431903 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 289-385 |
| Cow position: | chrX:25282769-25282865 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-410 |
| Cow position: | chrX:12988-12867 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-410 |
| Cow position: | chrX:1571352-1571470 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 289-410 |
| Cow position: | chrX:34991606-34991483 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 289-415 |
| Cow position: | chrX:42165373-42165502 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 289-440 |
| Cow position: | chrX:597234-597397 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 289-459 |
| Cow position: | chrX:11529583-11529401 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 123, 172 |
| Conread position: | 289-499 |
| Cow position: | chrX:4152800-4153016 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 289-499 |
| Cow position: | chrX:6599529-6599767 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 289-499 |
| Cow position: | chrX:13177240-13177463 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 289-499 |
| Cow position: | chrX:16836050-16836271 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 290-499 |
| Cow position: | chrX:41871300-41871082 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 122, 21 |
| Conread position: | 291-499 |
| Cow position: | chrX:4399361-4399141 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 213 |
| Conread position: | 291-499 |
| Cow position: | chrX:29230250-29230014 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 292-406 |
| Cow position: | chrX:25207619-25207734 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 292-406 |
| Cow position: | chrX:41199464-41199350 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-410 |
| Cow position: | chrX:5487706-5487820 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 292-410 |
| Cow position: | chrX:42875451-42875331 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 292-499 |
| Cow position: | chrX:11325867-11326082 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 22 |
| Conread position: | 292-499 |
| Cow position: | chrX:12437041-12437255 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 124 |
| Conread position: | 292-499 |
| Cow position: | chrX:19394797-19394568 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 293-380 |
| Cow position: | chrX:33153756-33153669 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-410 |
| Cow position: | chrX:8759865-8759741 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 293-446 |
| Cow position: | chrX:39642387-39642552 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 293-455 |
| Cow position: | chrX:14135916-14135739 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 293-499 |
| Cow position: | chrX:42927589-42927809 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 118, 58 |
| Conread position: | 294-382 |
| Cow position: | chrX:42161088-42160998 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 294-410 |
| Cow position: | chrX:20666662-20666774 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 294-470 |
| Cow position: | chrX:25232222-25232044 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 294-489 |
| Cow position: | chrX:32867110-32866900 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 294-495 |
| Cow position: | chrX:28940484-28940261 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 294-496 |
| Cow position: | chrX:1466403-1466180 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 294-498 |
| Cow position: | chrX:6544485-6544273 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 294-499 |
| Cow position: | chrX:16984875-16984656 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 294-499 |
| Cow position: | chrX:20584552-20584343 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 117 |
| Conread position: | 295-398 |
| Cow position: | chrX:11717485-11717584 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 295-410 |
| Cow position: | chrX:38726905-38727019 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 295-441 |
| Cow position: | chrX:4486785-4486948 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 295-472 |
| Cow position: | chrX:33539390-33539212 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 295-498 |
| Cow position: | chrX:20583899-20583682 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 295-499 |
| Cow position: | chrX:27668723-27668943 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 81, 58 |
| Conread position: | 296-410 |
| Cow position: | chrX:17525639-17525748 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 296-445 |
| Cow position: | chrX:24054899-24054748 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 84 |
| Conread position: | 296-499 |
| Cow position: | chrX:27306677-27306469 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 72, 90 |
| Conread position: | 296-499 |
| Cow position: | chrX:35224515-35224311 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 297-383 |
| Cow position: | chrX:36069474-36069388 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-410 |
| Cow position: | chrX:13893043-13892936 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 297-410 |
| Cow position: | chrX:26625243-26625353 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 297-493 |
| Cow position: | chrX:1499891-1499686 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 297-498 |
| Cow position: | chrX:43115386-43115167 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 187 |
| Conread position: | 297-499 |
| Cow position: | chrX:34792086-34792296 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 298-441 |
| Cow position: | chrX:4750102-4750256 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 50 |
| Conread position: | 298-489 |
| Cow position: | chrX:37072622-37072414 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 298-495 |
| Cow position: | chrX:34314257-34314042 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 298-499 |
| Cow position: | chrX:4467187-4466982 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 298-499 |
| Cow position: | chrX:21986065-21986275 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 177 |
| Conread position: | 299-410 |
| Cow position: | chrX:3494815-3494928 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 299-499 |
| Cow position: | chrX:34377174-34376957 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 299-499 |
| Cow position: | chrX:37575051-37574855 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 144, 86 |
| Conread position: | 300-398 |
| Cow position: | chrX:23182733-23182831 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 300-410 |
| Cow position: | chrX:8327139-8327023 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 300-410 |
| Cow position: | chrX:23497463-23497572 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 300-497 |
| Cow position: | chrX:11938719-11938918 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 143, 84 |
| Conread position: | 300-499 |
| Cow position: | chrX:8925914-8925714 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 301-499 |
| Cow position: | chrX:38094293-38094501 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 301-499 |
| Cow position: | chrX:47248564-47248769 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 124, 83 |
| Conread position: | 302-488 |
| Cow position: | chrX:23358885-23359085 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 161 |
| Conread position: | 302-496 |
| Cow position: | chrX:22075027-22074814 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 302-498 |
| Cow position: | chrX:29541996-29542201 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 303-410 |
| Cow position: | chrX:31279696-31279805 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 303-499 |
| Cow position: | chrX:6559225-6559433 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 303-499 |
| Cow position: | chrX:38218944-38218729 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 304-482 |
| Cow position: | chrX:23471638-23471834 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 304-499 |
| Cow position: | chrX:9251933-9252148 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 304-499 |
| Cow position: | chrX:10251972-10252183 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 69, 184 |
| Conread position: | 304-499 |
| Cow position: | chrX:38560780-38560574 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 306-499 |
| Cow position: | chrX:9201771-9201563 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 307-417 |
| Cow position: | chrX:13924088-13923974 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 307-484 |
| Cow position: | chrX:4942053-4942228 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 309-499 |
| Cow position: | chrX:20881736-20881924 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 68, 102 |
| Conread position: | 311-413 |
| Cow position: | chrX:42216410-42216515 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 313-498 |
| Cow position: | chrX:31436690-31436490 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 318-498 |
| Cow position: | chrX:45382845-45383029 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 323-499 |
| Cow position: | chrX:46069974-46070157 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 87 |
Show alignments to all cow chromosomes.