Cow genome map

Conread name: rhyp26c_h22.y1

Conread position: 109-242
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 22

Conread position: 112-239
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 120-231
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 122-227
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 122-230
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 80

Conread position: 122-231
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 26

Conread position: 122-231
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 122-231
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 122-238
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 122-239
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 26

Conread position: 122-242
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 122-242
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 122-243
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 122-245
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 30

Conread position: 122-267
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 22

Conread position: 122-358
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 67, 188

Conread position: 122-447
Cow position:
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 122-447
Cow position:
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 216

Conread position: 122-447
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 111

Conread position: 123-239
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 123-242
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 123-242
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 27

Conread position: 123-245
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 123-420
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 121

Conread position: 123-447
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 0

Conread position: 123-447
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 199

Conread position: 123-448
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 144

Conread position: 124-231
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 124-239
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 16

Conread position: 124-434
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 68

Conread position: 126-238
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 126-242
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 126-243
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 126-350
Cow position:
Alignm length: 233
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 102

Conread position: 126-387
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 123

Conread position: 126-438
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 64, 166

Conread position: 127-239
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 127-255
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 17

Conread position: 171-328
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 123

Conread position: 183-447
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 18

Conread position: 210-337
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 30

Conread position: 219-424
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 21

Conread position: 220-406
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 96

Conread position: 220-406
Cow position:
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 74

Conread position: 221-421
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 151

Conread position: 223-406
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 223-447
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 90

Conread position: 224-424
Cow position:
Alignm length: 207
Alignm identity: 162
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 9

Conread position: 226-424
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 150

Conread position: 226-424
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 109

Conread position: 226-441
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 44

Conread position: 226-447
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 7

Conread position: 226-448
Cow position:
Alignm length: 237
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 227-439
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 228-424
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 146

Conread position: 228-439
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 12

Conread position: 229-447
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 230-436
Cow position:
Alignm length: 215
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 159

Conread position: 233-424
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 122

Conread position: 234-406
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 236-422
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 84

Conread position: 236-423
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 236-424
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 236-439
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 19

Conread position: 236-439
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 56, 44

Conread position: 236-439
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 122

Conread position: 236-439
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 35

Conread position: 236-446
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 39, 123

Conread position: 236-447
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 191

Conread position: 236-447
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 23

Conread position: 236-448
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 72

Conread position: 237-394
Cow position:
Alignm length: 162
Alignm identity: 132
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 237-436
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 5, 0

Conread position: 238-386
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 238-447
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 39, 0

Conread position: 238-448
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 46

Conread position: 238-448
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 74

Conread position: 239-403
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 239-421
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 52

Conread position: 239-422
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 239-436
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 239-438
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 71

Conread position: 239-447
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 105

Conread position: 239-448
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 17

Conread position: 239-448
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 45

Conread position: 239-455
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 188

Conread position: 240-352
Cow position:
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 240-357
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 240-372
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 240-374
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 240-378
Cow position:
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 240-386
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 55

Conread position: 240-394
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 120

Conread position: 240-398
Cow position:
Alignm length: 161
Alignm identity: 132
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 240-398
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 91

Conread position: 240-402
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 240-421
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 62

Conread position: 240-422
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 240-422
Cow position:
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 91

Conread position: 240-424
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 69

Conread position: 240-424
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 155

Conread position: 240-436
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 51

Conread position: 240-436
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 56

Conread position: 240-438
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 67

Conread position: 240-439
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 66

Conread position: 240-440
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 240-441
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 131

Conread position: 240-444
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 124

Conread position: 240-446
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 124

Conread position: 240-446
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 240-447
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 122

Conread position: 240-447
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 120, 51

Conread position: 240-448
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 120, 51

Conread position: 240-457
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 151, 120

Conread position: 241-424
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 242-448
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 80

Conread position: 245-406
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 130

Conread position: 245-422
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 98

Conread position: 245-424
Cow position:
Alignm length: 181
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 0

Conread position: 245-424
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 128

Conread position: 245-447
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 84

Conread position: 245-447
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 245-447
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 112

Conread position: 245-448
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 56

Conread position: 246-438
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 120

Conread position: 251-439
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 29

Conread position: 253-425
Cow position:
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 92

Conread position: 253-447
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 257-380
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 107

Conread position: 274-439
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 97

Show alignments to all cow chromosomes.