Cow genome map
| Conread name: | rhyp26c_h22.y1 |
| Conread position: | 109-242 |
| Cow position: | chr1:6130600-6130737 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 112-239 |
| Cow position: | chr1:6794791-6794923 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 120-231 |
| Cow position: | chr1:4788658-4788544 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 122-227 |
| Cow position: | chr1:5102370-5102478 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 122-230 |
| Cow position: | chr1:48255894-48255784 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 122-231 |
| Cow position: | chr1:5347181-5347069 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 122-231 |
| Cow position: | chr1:73901126-73901015 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 122-231 |
| Cow position: | chr1:75183629-75183741 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-238 |
| Cow position: | chr1:80384641-80384764 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-239 |
| Cow position: | chr1:80973486-80973605 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 122-242 |
| Cow position: | chr1:28678645-28678518 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-242 |
| Cow position: | chr1:70236144-70236266 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 122-243 |
| Cow position: | chr1:35843804-35843932 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-245 |
| Cow position: | chr1:69004513-69004388 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 122-267 |
| Cow position: | chr1:74946996-74947148 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 122-358 |
| Cow position: | chr1:73363565-73363821 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 67, 188 |
| Conread position: | 122-447 |
| Cow position: | chr1:25184233-25183885 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 122-447 |
| Cow position: | chr1:56643482-56643829 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 216 |
| Conread position: | 122-447 |
| Cow position: | chr1:61661204-61661545 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 66, 111 |
| Conread position: | 123-239 |
| Cow position: | chr1:61737217-61737098 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 123-242 |
| Cow position: | chr1:5278293-5278415 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 123-242 |
| Cow position: | chr1:89548308-89548189 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 123-245 |
| Cow position: | chr1:76170323-76170197 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 123-420 |
| Cow position: | chr1:53920708-53920435 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 123-447 |
| Cow position: | chr1:49131010-49131362 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 123-447 |
| Cow position: | chr1:56073353-56073702 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 44, 199 |
| Conread position: | 123-448 |
| Cow position: | chr1:4239628-4239296 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 124-231 |
| Cow position: | chr1:80897777-80897888 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 124-239 |
| Cow position: | chr1:8192615-8192731 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 124-434 |
| Cow position: | chr1:40497650-40497355 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 68 |
| Conread position: | 126-238 |
| Cow position: | chr1:71136271-71136152 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 126-242 |
| Cow position: | chr1:73653524-73653643 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 126-243 |
| Cow position: | chr1:3657247-3657369 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 126-350 |
| Cow position: | chr1:97603520-97603749 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 126-387 |
| Cow position: | chr1:75199223-75198966 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 75, 123 |
| Conread position: | 126-438 |
| Cow position: | chr1:73522056-73522375 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 64, 166 |
| Conread position: | 127-239 |
| Cow position: | chr1:30413708-30413593 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 127-255 |
| Cow position: | chr1:62713838-62713968 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 171-328 |
| Cow position: | chr1:67564815-67564976 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 183-447 |
| Cow position: | chr1:2765437-2765177 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 6, 18 |
| Conread position: | 210-337 |
| Cow position: | chr1:44746862-44746734 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 219-424 |
| Cow position: | chr1:15691322-15691122 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 220-406 |
| Cow position: | chr1:16972850-16973036 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 220-406 |
| Cow position: | chr1:95654724-95654913 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 221-421 |
| Cow position: | chr1:94526490-94526282 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 151 |
| Conread position: | 223-406 |
| Cow position: | chr1:77383752-77383563 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 223-447 |
| Cow position: | chr1:41735637-41735865 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 90 |
| Conread position: | 224-424 |
| Cow position: | chr1:31871410-31871205 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 9 |
| Conread position: | 226-424 |
| Cow position: | chr1:26688492-26688693 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 150 |
| Conread position: | 226-424 |
| Cow position: | chr1:64938958-64939158 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 109 |
| Conread position: | 226-441 |
| Cow position: | chr1:70533957-70534168 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 226-447 |
| Cow position: | chr1:76850744-76850962 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 226-448 |
| Cow position: | chr1:6794941-6795177 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 227-439 |
| Cow position: | chr1:66355736-66355938 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 228-424 |
| Cow position: | chr1:20521709-20521898 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 228-439 |
| Cow position: | chr1:85783504-85783296 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 229-447 |
| Cow position: | chr1:56408599-56408373 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 230-436 |
| Cow position: | chr1:5162067-5162279 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 159 |
| Conread position: | 233-424 |
| Cow position: | chr1:64189474-64189287 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 234-406 |
| Cow position: | chr1:55202649-55202815 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 236-422 |
| Cow position: | chr1:84601954-84602150 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 84 |
| Conread position: | 236-423 |
| Cow position: | chr1:50634427-50634620 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 236-424 |
| Cow position: | chr1:84015851-84015656 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 236-439 |
| Cow position: | chr1:4441138-4441335 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 236-439 |
| Cow position: | chr1:6322177-6321979 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 236-439 |
| Cow position: | chr1:54162833-54163042 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 236-439 |
| Cow position: | chr1:98613208-98613012 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 236-446 |
| Cow position: | chr1:70282909-70282696 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 236-447 |
| Cow position: | chr1:41697032-41696817 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 191 |
| Conread position: | 236-447 |
| Cow position: | chr1:92551162-92551375 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 236-448 |
| Cow position: | chr1:71136123-71135912 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 72 |
| Conread position: | 237-394 |
| Cow position: | chr1:74947151-74947312 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 237-436 |
| Cow position: | chr1:9869875-9870080 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 238-386 |
| Cow position: | chr1:13195449-13195602 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 238-447 |
| Cow position: | chr1:95467362-95467579 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 238-448 |
| Cow position: | chr1:32341238-32341448 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 238-448 |
| Cow position: | chr1:95765118-95765330 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 239-403 |
| Cow position: | chr1:82337811-82337979 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 239-421 |
| Cow position: | chr1:81228372-81228552 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 239-422 |
| Cow position: | chr1:46839571-46839381 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 239-436 |
| Cow position: | chr1:78750717-78750922 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 239-438 |
| Cow position: | chr1:7657343-7657545 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 239-447 |
| Cow position: | chr1:63905502-63905714 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 105 |
| Conread position: | 239-448 |
| Cow position: | chr1:3657395-3657608 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 239-448 |
| Cow position: | chr1:81913185-81913393 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 120, 45 |
| Conread position: | 239-455 |
| Cow position: | chr1:5061997-5061776 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 188 |
| Conread position: | 240-352 |
| Cow position: | chr1:38692633-38692517 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-357 |
| Cow position: | chr1:52449638-52449759 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-372 |
| Cow position: | chr1:46205787-46205651 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 240-374 |
| Cow position: | chr1:75347590-75347451 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-378 |
| Cow position: | chr1:57782973-57782840 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 240-386 |
| Cow position: | chr1:68618964-68619115 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 240-394 |
| Cow position: | chr1:2997915-2997758 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 240-398 |
| Cow position: | chr1:69004363-69004203 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 240-398 |
| Cow position: | chr1:89548160-89548000 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 240-402 |
| Cow position: | chr1:89443513-89443670 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 240-421 |
| Cow position: | chr1:56635064-56634886 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 240-422 |
| Cow position: | chr1:69415744-69415931 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 240-422 |
| Cow position: | chr1:85651800-85651974 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 240-424 |
| Cow position: | chr1:90423115-90423301 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 240-424 |
| Cow position: | chr1:99807752-99807939 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 155 |
| Conread position: | 240-436 |
| Cow position: | chr1:6881257-6881453 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 240-436 |
| Cow position: | chr1:28567464-28567666 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 240-438 |
| Cow position: | chr1:21934207-21934403 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 240-439 |
| Cow position: | chr1:76096404-76096210 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 66 |
| Conread position: | 240-440 |
| Cow position: | chr1:30882364-30882546 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 240-441 |
| Cow position: | chr1:80973637-80973848 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 131 |
| Conread position: | 240-444 |
| Cow position: | chr1:29916377-29916177 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 240-446 |
| Cow position: | chr1:51836539-51836332 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 240-446 |
| Cow position: | chr1:95215212-95215425 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 240-447 |
| Cow position: | chr1:44506937-44506728 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 122 |
| Conread position: | 240-447 |
| Cow position: | chr1:79663700-79663906 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 240-448 |
| Cow position: | chr1:95176904-95176694 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 120, 51 |
| Conread position: | 240-457 |
| Cow position: | chr1:8869694-8869914 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 151, 120 |
| Conread position: | 241-424 |
| Cow position: | chr1:57247400-57247222 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 242-448 |
| Cow position: | chr1:55146769-55146560 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 245-406 |
| Cow position: | chr1:70236324-70236489 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 245-422 |
| Cow position: | chr1:29975639-29975811 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 98 |
| Conread position: | 245-424 |
| Cow position: | chr1:9443885-9444065 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 245-424 |
| Cow position: | chr1:10719517-10719700 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 128 |
| Conread position: | 245-447 |
| Cow position: | chr1:4385325-4385108 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 245-447 |
| Cow position: | chr1:14528232-14528440 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 245-447 |
| Cow position: | chr1:62732540-62732335 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 245-448 |
| Cow position: | chr1:53039737-53039940 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 246-438 |
| Cow position: | chr1:101812313-101812506 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 120 |
| Conread position: | 251-439 |
| Cow position: | chr1:33986562-33986747 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 253-425 |
| Cow position: | chr1:30413544-30413371 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 253-447 |
| Cow position: | chr1:13056572-13056768 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 257-380 |
| Cow position: | chr1:102642831-102642706 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 274-439 |
| Cow position: | chr1:92642510-92642671 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 40, 97 |
Show alignments to all cow chromosomes.