Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               108-447
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               122-225
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-232
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               122-441
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-451
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               123-239
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               123-243
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               123-424
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               127-242
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               136-389
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               147-406
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               148-397
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               43, 257
               

               Conread position:
               174-448
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               208-374
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               211-421
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               217-444
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               220-436
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               67, 23
               

               Conread position:
               221-406
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               221-448
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 111
               

               Conread position:
               224-438
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               15, 151
               

               Conread position:
               226-389
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               226-392
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               226-423
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               60, 83
               

               Conread position:
               226-435
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               200, 69
               

               Conread position:
               226-447
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               226-447
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 71
               

               Conread position:
               230-441
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               233-417
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 73
               

               Conread position:
               233-436
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               237-406
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               237-443
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               181, 26
               

               Conread position:
               237-445
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 126
               

               Conread position:
               238-446
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               239-420
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               239-436
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 188
               

               Conread position:
               239-447
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 86
               

               Conread position:
               240-372
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 73
               

               Conread position:
               240-381
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               240-404
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               240-405
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               240-422
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-424
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 167
               

               Conread position:
               240-434
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               37, 67
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               37, 126
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               240-439
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               122, 63
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 121
               

               Conread position:
               241-448
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               5, 61
               

               Conread position:
               245-339
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               245-386
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               245-421
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 118
               

               Conread position:
               245-423
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               245-423
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               245-448
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               247-435
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               30, 114
               

               Conread position:
               247-441
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               248-447
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 62
               

               Conread position:
               248-447
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 109
               

               Conread position:
               257-448
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               275-424
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 53
               

               Conread position:
               280-450
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.