Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               67, 52
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-355
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-424
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               122-424
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 19
               

               Conread position:
               122-446
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 136
               

               Conread position:
               122-448
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               67, 261
               

               Conread position:
               122-452
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               57, 175
               

               Conread position:
               123-237
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               123-244
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               123-393
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               123-447
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               123-447
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               124-252
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               124-447
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               125-447
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 216
               

               Conread position:
               126-231
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               49, 55
               

               Conread position:
               126-231
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               126-375
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               126-392
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 83
               

               Conread position:
               126-424
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               127-239
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               141-448
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 150
               

               Conread position:
               143-422
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 210
               

               Conread position:
               144-440
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               145-424
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               158-450
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               221-424
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 147
               

               Conread position:
               222-441
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               12, 206
               

               Conread position:
               224-358
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               226-417
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               230-422
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 95
               

               Conread position:
               233-437
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               235-446
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               236-436
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               236-437
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               236-441
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               236-447
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               41, 174
               

               Conread position:
               237-397
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 124
               

               Conread position:
               237-424
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               237-446
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               237-447
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               238-405
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-406
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               238-435
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               238-446
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               239-369
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               239-380
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               239-380
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               239-404
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               147
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               7, 113
               

               Conread position:
               239-421
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               37, 59
               

               Conread position:
               239-421
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 122
               

               Conread position:
               239-425
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               239-436
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 51
               

               Conread position:
               239-441
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               239-447
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 144
               

               Conread position:
               240-342
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-378
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               240-385
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               240-404
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               240-404
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               240-424
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 123
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               240-446
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               240-446
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 135
               

               Conread position:
               240-446
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 125
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 132
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 120
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 73
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               240-452
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 145
               

               Conread position:
               240-460
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               241-446
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               242-406
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 121
               

               Conread position:
               245-380
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               245-406
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               245-424
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               32, 114
               

               Conread position:
               245-448
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               246-406
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               246-436
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 68
               

               Conread position:
               247-447
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 69
               

               Conread position:
               249-436
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               250-424
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 156
               

               Conread position:
               272-424
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               88, 0
               
Show alignments to all cow chromosomes.