Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               107-242
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               119-351
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               120-342
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               122-224
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 100
               

               Conread position:
               122-226
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-246
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-246
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               122-252
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               122-350
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               65, 217
               

               Conread position:
               122-385
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               66, 186
               

               Conread position:
               122-439
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               45, 255
               

               Conread position:
               122-446
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 256
               

               Conread position:
               122-448
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               122-448
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               123-418
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 197
               

               Conread position:
               123-447
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 40
               

               Conread position:
               124-439
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 78
               

               Conread position:
               124-441
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 199
               

               Conread position:
               125-231
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               126-447
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               130-447
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               207-447
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               220-422
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               221-362
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               221-377
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               221-424
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               221-447
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 157
               

               Conread position:
               222-421
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               226-391
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               226-446
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 72
               

               Conread position:
               226-447
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               7, 209
               

               Conread position:
               226-449
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 135
               

               Conread position:
               233-406
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               233-447
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               236-351
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               236-380
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               236-406
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               236-421
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 127
               

               Conread position:
               236-444
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 175
               

               Conread position:
               236-447
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               152, 43
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 125
               

               Conread position:
               237-448
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               238-386
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               238-417
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               238-417
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               239-421
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               239-423
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               239-437
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               181, 45
               

               Conread position:
               239-446
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               117, 58
               

               Conread position:
               239-447
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               240-406
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               240-418
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               240-438
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               240-438
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               240-439
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               240-443
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 180
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 74
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 124
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 104
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               245-423
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 115
               

               Conread position:
               245-435
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 129
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               245-448
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               245-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               249-448
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               250-447
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               110, 34
               

               Conread position:
               282-424
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 124
               
Show alignments to all cow chromosomes.