Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               110-447
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               71, 129
               

               Conread position:
               122-223
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               122-238
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-244
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               122-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               122-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               122-246
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               122-308
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-315
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 202
               

               Conread position:
               122-339
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               122-358
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               67, 209
               

               Conread position:
               122-380
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               122-386
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               122-422
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               72, 258
               

               Conread position:
               122-423
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               122-424
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               67, 81
               

               Conread position:
               122-437
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               123-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               123-240
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               123-308
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               123-447
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               60, 258
               

               Conread position:
               124-239
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               124-255
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 93
               

               Conread position:
               124-357
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               124-447
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               125-242
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               125-243
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               126-243
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-424
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 201
               

               Conread position:
               126-439
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               127-269
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               62, 10
               

               Conread position:
               127-447
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               128-424
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               129-447
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               130-391
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               149-423
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 14
               

               Conread position:
               150-436
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 182
               

               Conread position:
               163-447
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               196-406
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               201-435
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               201-439
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               202-422
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 112
               

               Conread position:
               207-438
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               208-424
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               216-424
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               26, 145
               

               Conread position:
               222-441
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 6
               

               Conread position:
               225-421
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               225-447
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               226-422
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               226-448
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               227-447
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               233-385
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               235-441
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               236-397
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               236-418
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               236-421
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 105
               

               Conread position:
               236-421
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 147
               

               Conread position:
               237-342
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               237-438
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               238-394
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               238-406
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               238-424
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               238-438
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 115
               

               Conread position:
               238-438
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               187, 8
               

               Conread position:
               238-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               239-435
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               239-447
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               240-373
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               120, 40
               

               Conread position:
               240-381
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-397
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               240-398
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 123
               

               Conread position:
               240-406
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 127
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               183, 30
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               241-439
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               245-349
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               245-356
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               245-361
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 111
               

               Conread position:
               245-391
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               245-417
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               245-424
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 118
               

               Conread position:
               245-438
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               245-439
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 50
               

               Conread position:
               245-441
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               246-338
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               246-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               246-447
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               249-447
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               26, 99
               

               Conread position:
               274-448
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               133, 86
               

               Conread position:
               275-435
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 150
               
Show alignments to all cow chromosomes.