Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               109-245
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               117-425
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               122-238
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 98
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-317
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 150
               

               Conread position:
               122-323
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               122-418
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 157
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               59, 178
               

               Conread position:
               123-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               123-385
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               123-396
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 260
               

               Conread position:
               123-405
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               123-446
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               124-358
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 197
               

               Conread position:
               125-446
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 320
               

               Conread position:
               126-441
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               127-267
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               170-438
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               204-421
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               222-448
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               204, 141
               

               Conread position:
               226-447
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               226-448
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               227-339
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               227-399
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               227-402
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               227-441
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               227-448
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               233-342
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               238-441
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 142
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               186, 120
               

               Conread position:
               239-450
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 51
               

               Conread position:
               240-380
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-417
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 94
               

               Conread position:
               240-421
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 43
               

               Conread position:
               240-438
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 119
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               120, 51
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               15, 22
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               194, 40
               

               Conread position:
               242-448
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               184, 47
               

               Conread position:
               245-407
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 138
               

               Conread position:
               245-423
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               245-424
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               246-436
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               67, 178
               

               Conread position:
               247-447
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               113, 28
               

               Conread position:
               250-424
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               253-439
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               
Show alignments to all cow chromosomes.