Cow genome map
| Conread name: | rhyp26c_h22.y1 |
| Conread position: | 122-231 |
| Cow position: | chr25:20624821-20624933 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 122-239 |
| Cow position: | chr25:22542699-22542816 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 122-267 |
| Cow position: | chr25:33111861-33112004 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 122-419 |
| Cow position: | chr25:34970577-34970260 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 125-350 |
| Cow position: | chr25:17701882-17702123 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 205 |
| Conread position: | 126-231 |
| Cow position: | chr25:23410769-23410666 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 126-441 |
| Cow position: | chr25:25962052-25961721 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 155 |
| Conread position: | 127-447 |
| Cow position: | chr25:10011949-10012298 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 63, 248 |
| Conread position: | 131-456 |
| Cow position: | chr25:14466988-14467340 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 306 |
| Conread position: | 133-448 |
| Cow position: | chr25:27504097-27504435 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 153-448 |
| Cow position: | chr25:20496586-20496290 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 195 |
| Conread position: | 195-447 |
| Cow position: | chr25:31732728-31732985 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 100 |
| Conread position: | 224-436 |
| Cow position: | chr25:40957011-40957222 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 226-424 |
| Cow position: | chr25:18266135-18265939 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 229-437 |
| Cow position: | chr25:8560834-8560630 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 233-423 |
| Cow position: | chr25:29312372-29312565 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 236-383 |
| Cow position: | chr25:32606357-32606509 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 238-447 |
| Cow position: | chr25:24405772-24405985 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 239-447 |
| Cow position: | chr25:24136478-24136684 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 185, 121 |
| Conread position: | 240-380 |
| Cow position: | chr25:26457720-26457864 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 240-406 |
| Cow position: | chr25:8512130-8512301 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 143 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-421 |
| Cow position: | chr25:12239187-12239369 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 124 |
| Conread position: | 240-424 |
| Cow position: | chr25:14570332-14570145 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 240-424 |
| Cow position: | chr25:17365301-17365481 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 95 |
| Conread position: | 240-436 |
| Cow position: | chr25:16001564-16001758 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 240-446 |
| Cow position: | chr25:4002761-4002548 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 240-447 |
| Cow position: | chr25:8918317-8918527 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 240-447 |
| Cow position: | chr25:22909897-22910093 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 240-448 |
| Cow position: | chr25:10138051-10137848 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 183, 36 |
| Conread position: | 240-450 |
| Cow position: | chr25:22575560-22575770 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 155 |
| Conread position: | 241-436 |
| Cow position: | chr25:2126425-2126234 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 246-426 |
| Cow position: | chr25:16007748-16007563 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 29, 177 |
| Conread position: | 247-436 |
| Cow position: | chr25:12234808-12234994 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 251-373 |
| Cow position: | chr25:33411210-33411081 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 257-437 |
| Cow position: | chr25:8576635-8576454 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 260-447 |
| Cow position: | chr25:33112059-33112247 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 265-441 |
| Cow position: | chr25:10748573-10748745 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 156, 24 |
Show alignments to all cow chromosomes.