Cow genome map
| Conread name: | rhyp26c_h22.y1 |
| Conread position: | 121-242 |
| Cow position: | chr26:7955986-7955859 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 122-239 |
| Cow position: | chr26:19935228-19935347 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 122-242 |
| Cow position: | chr26:11567840-11567962 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 122-242 |
| Cow position: | chr26:18719387-18719264 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 122-246 |
| Cow position: | chr26:24182916-24183040 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 122-255 |
| Cow position: | chr26:12520161-12520019 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 122-336 |
| Cow position: | chr26:34591759-34591544 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 122-353 |
| Cow position: | chr26:3019284-3019518 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 152 |
| Conread position: | 122-406 |
| Cow position: | chr26:33227925-33227619 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 264 |
| Conread position: | 122-438 |
| Cow position: | chr26:33212256-33212588 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 122-447 |
| Cow position: | chr26:7054125-7053799 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 123-231 |
| Cow position: | chr26:3756355-3756244 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 123-242 |
| Cow position: | chr26:27585904-27585783 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 106 |
| Conread position: | 123-441 |
| Cow position: | chr26:8651476-8651799 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 180 |
| Conread position: | 123-448 |
| Cow position: | chr26:17675636-17675961 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 124-458 |
| Cow position: | chr26:2388937-2389292 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 330 |
| Conread position: | 125-412 |
| Cow position: | chr26:12652114-12652392 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 161 |
| Conread position: | 126-231 |
| Cow position: | chr26:2769712-2769821 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 126-231 |
| Cow position: | chr26:10523323-10523429 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 126-242 |
| Cow position: | chr26:12216978-12216863 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 126-244 |
| Cow position: | chr26:30605237-30605354 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 115, 72 |
| Conread position: | 140-422 |
| Cow position: | chr26:7102930-7103239 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 92 |
| Conread position: | 217-381 |
| Cow position: | chr26:22249474-22249644 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 217-448 |
| Cow position: | chr26:12669203-12668969 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 224-448 |
| Cow position: | chr26:19769090-19769316 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 132, 5 |
| Conread position: | 226-390 |
| Cow position: | chr26:30605367-30605534 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 226-450 |
| Cow position: | chr26:17289197-17288973 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 230-448 |
| Cow position: | chr26:9064329-9064116 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 10 |
| Conread position: | 233-420 |
| Cow position: | chr26:33567060-33567244 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 236-447 |
| Cow position: | chr26:2246939-2246718 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 239-393 |
| Cow position: | chr26:14924463-14924311 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 239-422 |
| Cow position: | chr26:17992448-17992627 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 151, 54 |
| Conread position: | 239-448 |
| Cow position: | chr26:20129692-20129906 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 240-389 |
| Cow position: | chr26:16510768-16510612 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 240-398 |
| Cow position: | chr26:21921663-21921812 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 240-421 |
| Cow position: | chr26:16549964-16549778 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 240-424 |
| Cow position: | chr26:29353527-29353716 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-447 |
| Cow position: | chr26:9666430-9666637 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 241-417 |
| Cow position: | chr26:19110889-19110704 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 36, 128 |
| Conread position: | 241-447 |
| Cow position: | chr26:27491523-27491733 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 245-356 |
| Cow position: | chr26:27585748-27585634 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 245-406 |
| Cow position: | chr26:782959-783121 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 245-438 |
| Cow position: | chr26:9632397-9632590 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 245-447 |
| Cow position: | chr26:2769866-2770066 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 245-447 |
| Cow position: | chr26:8504237-8504028 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 245-447 |
| Cow position: | chr26:10814174-10813984 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 247-358 |
| Cow position: | chr26:19178588-19178474 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 248-447 |
| Cow position: | chr26:23272756-23272553 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 252-447 |
| Cow position: | chr26:6323632-6323435 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 256-441 |
| Cow position: | chr26:4747892-4748081 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 108 |
Show alignments to all cow chromosomes.