Cow genome map
| Conread name: | rhyp26c_h22.y1 |
| Conread position: | 118-424 |
| Cow position: | chr3:70129733-70130057 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 119-437 |
| Cow position: | chr3:65771239-65771574 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 119-439 |
| Cow position: | chr3:32596849-32597188 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 76, 26 |
| Conread position: | 122-231 |
| Cow position: | chr3:54126164-54126275 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 122-238 |
| Cow position: | chr3:5419771-5419890 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-238 |
| Cow position: | chr3:15221425-15221548 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 122-238 |
| Cow position: | chr3:77297225-77297340 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 122-239 |
| Cow position: | chr3:24538965-24538845 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-242 |
| Cow position: | chr3:37452161-37452038 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 122-242 |
| Cow position: | chr3:74611656-74611533 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 122-243 |
| Cow position: | chr3:10431692-10431569 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 68, 84 |
| Conread position: | 122-244 |
| Cow position: | chr3:23477083-23476956 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 122-244 |
| Cow position: | chr3:53588292-53588421 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 122-267 |
| Cow position: | chr3:55373476-55373626 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-307 |
| Cow position: | chr3:58632654-58632463 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 122-346 |
| Cow position: | chr3:48375146-48374923 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 122-424 |
| Cow position: | chr3:73777363-73777033 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 318 |
| Conread position: | 122-438 |
| Cow position: | chr3:4329412-4329073 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 122-438 |
| Cow position: | chr3:68262857-68262519 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-439 |
| Cow position: | chr3:74561331-74561665 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 54, 237 |
| Conread position: | 122-441 |
| Cow position: | chr3:1300308-1299969 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 243 |
| Conread position: | 122-444 |
| Cow position: | chr3:20092433-20092771 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 67, 233 |
| Conread position: | 122-445 |
| Cow position: | chr3:22953791-22954118 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 122-447 |
| Cow position: | chr3:17284920-17284566 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 80 |
| Conread position: | 122-447 |
| Cow position: | chr3:58285816-58286168 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 122-448 |
| Cow position: | chr3:22271362-22271707 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 55, 153 |
| Conread position: | 123-231 |
| Cow position: | chr3:5845011-5844900 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 123-231 |
| Cow position: | chr3:51255871-51255764 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 123-231 |
| Cow position: | chr3:58291801-58291912 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 123-239 |
| Cow position: | chr3:41718483-41718365 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 123-246 |
| Cow position: | chr3:61322932-61322806 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 123-432 |
| Cow position: | chr3:9074254-9074575 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 65, 252 |
| Conread position: | 123-447 |
| Cow position: | chr3:16809722-16810061 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 79 |
| Conread position: | 123-447 |
| Cow position: | chr3:56637743-56637396 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 124-252 |
| Cow position: | chr3:891355-891223 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 124-355 |
| Cow position: | chr3:50348025-50347787 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 124-404 |
| Cow position: | chr3:12576254-12576539 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 125-447 |
| Cow position: | chr3:58865384-58865729 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 126-231 |
| Cow position: | chr3:39910970-39911078 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 126-242 |
| Cow position: | chr3:51146582-51146700 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 104 |
| Conread position: | 126-251 |
| Cow position: | chr3:55991779-55991909 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 126-342 |
| Cow position: | chr3:61116316-61116537 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 126-437 |
| Cow position: | chr3:58350661-58350328 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 126-438 |
| Cow position: | chr3:33632819-33633148 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 126-447 |
| Cow position: | chr3:25091119-25090790 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 130-242 |
| Cow position: | chr3:62884288-62884173 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 135-385 |
| Cow position: | chr3:18757725-18757983 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 113 |
| Conread position: | 136-448 |
| Cow position: | chr3:50462381-50462071 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 137-243 |
| Cow position: | chr3:44861234-44861343 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 143-447 |
| Cow position: | chr3:38497993-38497682 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 57 |
| Conread position: | 152-447 |
| Cow position: | chr3:45744737-45744443 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 130 |
| Conread position: | 153-447 |
| Cow position: | chr3:44861278-44861578 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 159-439 |
| Cow position: | chr3:20437633-20437905 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 170-447 |
| Cow position: | chr3:23111489-23111774 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 172-436 |
| Cow position: | chr3:54862408-54862678 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 196-436 |
| Cow position: | chr3:890818-890587 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 202-397 |
| Cow position: | chr3:49218337-49218536 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 203-404 |
| Cow position: | chr3:61913581-61913375 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 38, 144 |
| Conread position: | 206-447 |
| Cow position: | chr3:11949381-11949623 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 217-421 |
| Cow position: | chr3:52652119-52652316 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 217-448 |
| Cow position: | chr3:79292791-79292563 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 126 |
| Conread position: | 225-389 |
| Cow position: | chr3:79376226-79376048 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 113 |
| Conread position: | 225-439 |
| Cow position: | chr3:51228125-51227896 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 129 |
| Conread position: | 225-446 |
| Cow position: | chr3:17742462-17742240 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 225-448 |
| Cow position: | chr3:23945051-23944826 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 51, 90 |
| Conread position: | 226-439 |
| Cow position: | chr3:37452024-37451810 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 8, 140 |
| Conread position: | 226-448 |
| Cow position: | chr3:77225069-77224849 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 226-448 |
| Cow position: | chr3:78530487-78530265 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 228-447 |
| Cow position: | chr3:34316006-34316234 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 228-448 |
| Cow position: | chr3:58540575-58540801 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 201 |
| Conread position: | 229-424 |
| Cow position: | chr3:36100784-36100583 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 229-447 |
| Cow position: | chr3:8923996-8923775 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 230-376 |
| Cow position: | chr3:10896780-10896631 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 234-378 |
| Cow position: | chr3:8790646-8790794 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 236-358 |
| Cow position: | chr3:78647448-78647322 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 236-362 |
| Cow position: | chr3:4082152-4082282 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 236-406 |
| Cow position: | chr3:15684982-15685144 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 236-406 |
| Cow position: | chr3:42594713-42594884 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 236-417 |
| Cow position: | chr3:71135736-71135550 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 236-421 |
| Cow position: | chr3:44932455-44932266 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 236-422 |
| Cow position: | chr3:23476946-23476755 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 236-445 |
| Cow position: | chr3:48433893-48433677 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 236-447 |
| Cow position: | chr3:4223257-4223045 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 5, 49 |
| Conread position: | 236-451 |
| Cow position: | chr3:22021031-22021247 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 237-406 |
| Cow position: | chr3:42489363-42489537 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 238-376 |
| Cow position: | chr3:28633313-28633460 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 238-436 |
| Cow position: | chr3:48629651-48629842 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 99 |
| Conread position: | 238-441 |
| Cow position: | chr3:42603771-42603566 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 238-441 |
| Cow position: | chr3:63237818-63238007 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 188, 37 |
| Conread position: | 238-447 |
| Cow position: | chr3:23169125-23169340 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 238-448 |
| Cow position: | chr3:18458719-18458927 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 239-386 |
| Cow position: | chr3:2198823-2198675 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 124 |
| Conread position: | 239-394 |
| Cow position: | chr3:58174846-58174686 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 30, 149 |
| Conread position: | 239-395 |
| Cow position: | chr3:55777973-55777816 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 69 |
| Conread position: | 239-424 |
| Cow position: | chr3:23092038-23092228 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 239-442 |
| Cow position: | chr3:50614577-50614374 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 124 |
| Conread position: | 239-447 |
| Cow position: | chr3:36174129-36174344 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 239-447 |
| Cow position: | chr3:81473950-81473734 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 239-448 |
| Cow position: | chr3:74699455-74699666 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 117, 165 |
| Conread position: | 240-357 |
| Cow position: | chr3:25079682-25079565 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-362 |
| Cow position: | chr3:61322782-61322661 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 108 |
| Conread position: | 240-379 |
| Cow position: | chr3:15859730-15859871 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-405 |
| Cow position: | chr3:61009498-61009662 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 240-420 |
| Cow position: | chr3:5419924-5420107 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 240-420 |
| Cow position: | chr3:55991928-55992112 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 240-421 |
| Cow position: | chr3:41367047-41367226 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 240-422 |
| Cow position: | chr3:7365945-7366118 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 240-424 |
| Cow position: | chr3:42584479-42584297 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 240-424 |
| Cow position: | chr3:66116172-66116357 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 240-436 |
| Cow position: | chr3:27532718-27532918 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 36, 187 |
| Conread position: | 240-436 |
| Cow position: | chr3:31907203-31907405 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 240-436 |
| Cow position: | chr3:42480555-42480363 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 240-438 |
| Cow position: | chr3:66708132-66708333 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 240-439 |
| Cow position: | chr3:54881699-54881497 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 111 |
| Conread position: | 240-446 |
| Cow position: | chr3:53588447-53588659 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 240-447 |
| Cow position: | chr3:12255416-12255210 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 240-447 |
| Cow position: | chr3:12711979-12712193 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 240-447 |
| Cow position: | chr3:19006598-19006397 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 183, 40 |
| Conread position: | 240-447 |
| Cow position: | chr3:74611503-74611292 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 240-448 |
| Cow position: | chr3:2393024-2393237 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 240-448 |
| Cow position: | chr3:23471528-23471739 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 80, 43 |
| Conread position: | 240-448 |
| Cow position: | chr3:55124345-55124549 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 158, 51 |
| Conread position: | 240-448 |
| Cow position: | chr3:67744688-67744899 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 115, 51 |
| Conread position: | 241-438 |
| Cow position: | chr3:65581077-65581277 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 55 |
| Conread position: | 242-386 |
| Cow position: | chr3:15977106-15976961 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 35, 121 |
| Conread position: | 243-422 |
| Cow position: | chr3:67044164-67044340 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 67 |
| Conread position: | 245-379 |
| Cow position: | chr3:74205876-74206010 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 245-404 |
| Cow position: | chr3:18216837-18216991 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 115, 39 |
| Conread position: | 245-404 |
| Cow position: | chr3:43657774-43657936 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 245-404 |
| Cow position: | chr3:47524572-47524734 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 129 |
| Conread position: | 245-445 |
| Cow position: | chr3:51146735-51146934 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 245-447 |
| Cow position: | chr3:22171121-22170919 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 245-447 |
| Cow position: | chr3:56703920-56704124 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 246-424 |
| Cow position: | chr3:19717159-19717332 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 246-447 |
| Cow position: | chr3:8457587-8457386 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 114, 64 |
| Conread position: | 246-448 |
| Cow position: | chr3:62292190-62292387 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 180, 49 |
| Conread position: | 246-450 |
| Cow position: | chr3:59206178-59205968 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 247-436 |
| Cow position: | chr3:42563385-42563196 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 247-439 |
| Cow position: | chr3:32870080-32869889 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 247-447 |
| Cow position: | chr3:51255720-51255514 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 248-447 |
| Cow position: | chr3:62884136-62883932 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 253-441 |
| Cow position: | chr3:55815264-55815080 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 253-441 |
| Cow position: | chr3:70913151-70913343 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 256-447 |
| Cow position: | chr3:52835979-52836172 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 260-436 |
| Cow position: | chr3:26669186-26669365 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 274-436 |
| Cow position: | chr3:68342352-68342511 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.