Cow genome map

Conread name: rhyp26c_h22.y1

Conread position: 107-232
Cow position: chr4:10992077-10992205 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 107-424
Cow position: chr4:30131459-30131133 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 142

Conread position: 109-356
Cow position: chr4:63784027-63784286 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 121-422
Cow position: chr4:7213488-7213813 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 228

Conread position: 121-441
Cow position: chr4:59888511-59888847 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 122-230
Cow position: chr4:51433519-51433404 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 122-231
Cow position: chr4:18439460-18439572 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 122-231
Cow position: chr4:31172781-31172670 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 53

Conread position: 122-239
Cow position: chr4:54146358-54146477 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 102
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 122-241
Cow position: chr4:22528278-22528400 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 122-242
Cow position: chr4:21365511-21365391 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 27

Conread position: 122-242
Cow position: chr4:53752631-53752508 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 122-242
Cow position: chr4:65604364-65604487 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 15

Conread position: 122-244
Cow position: chr4:39767458-39767333 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 36

Conread position: 122-246
Cow position: chr4:37881044-37880913 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 122-262
Cow position: chr4:33682071-33681925 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 69, 91

Conread position: 122-436
Cow position: chr4:26373566-26373910 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 43

Conread position: 122-456
Cow position: chr4:60031012-60030678 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 31

Conread position: 123-231
Cow position: chr4:2121291-2121404 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 123-231
Cow position: chr4:24415668-24415559 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 93

Conread position: 123-242
Cow position: chr4:23758911-23758790 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 101

Conread position: 123-245
Cow position: chr4:22249341-22249466 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 123-328
Cow position: chr4:50769657-50769877 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 163

Conread position: 123-379
Cow position: chr4:59719710-59719449 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 28

Conread position: 123-424
Cow position: chr4:10837274-10837584 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 177

Conread position: 123-447
Cow position: chr4:62411960-62411620 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 14

Conread position: 123-448
Cow position: chr4:59834034-59833685 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 263

Conread position: 124-242
Cow position: chr4:9800109-9799988 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 124-243
Cow position: chr4:1800013-1799891 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 124-437
Cow position: chr4:48499923-48499605 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 28

Conread position: 126-231
Cow position: chr4:35471423-35471315 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 126-242
Cow position: chr4:45919139-45919020 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 137-448
Cow position: chr4:8692106-8692415 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 149

Conread position: 179-424
Cow position: chr4:8650249-8650011 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 25

Conread position: 189-404
Cow position: chr4:65116196-65116422 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 20

Conread position: 199-448
Cow position: chr4:14159128-14159379 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 167

Conread position: 204-438
Cow position: chr4:10992206-10992445 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 13

Conread position: 207-448
Cow position: chr4:58834418-58834661 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 149, 84

Conread position: 212-378
Cow position: chr4:45738492-45738665 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 217-447
Cow position: chr4:38181661-38181427 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 71

Conread position: 217-448
Cow position: chr4:18489408-18489645 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 29, 8

Conread position: 221-406
Cow position: chr4:39767329-39767134 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 221-417
Cow position: chr4:5553812-5554015 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 221-424
Cow position: chr4:22115584-22115377 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 146

Conread position: 224-422
Cow position: chr4:13406675-13406479 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 138, 46

Conread position: 225-439
Cow position: chr4:9714700-9714484 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 8

Conread position: 226-424
Cow position: chr4:21259186-21258987 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 91

Conread position: 226-447
Cow position: chr4:22249481-22249697 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 78

Conread position: 226-448
Cow position: chr4:35870171-35869960 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 7

Conread position: 226-448
Cow position: chr4:44072797-44073025 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 58

Conread position: 227-448
Cow position: chr4:61271662-61271888 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 9

Conread position: 229-357
Cow position: chr4:63417956-63418089 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 229-447
Cow position: chr4:9845883-9845667 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 112

Conread position: 233-406
Cow position: chr4:21365369-21365194 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 132

Conread position: 234-362
Cow position: chr4:41154607-41154473 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 236-370
Cow position: chr4:15784849-15784988 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 236-394
Cow position: chr4:59565500-59565335 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 236-404
Cow position: chr4:21391853-21392024 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 127

Conread position: 236-419
Cow position: chr4:10915883-10916066 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 70

Conread position: 236-421
Cow position: chr4:54455384-54455570 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 110

Conread position: 236-447
Cow position: chr4:27561356-27561142 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 41, 126

Conread position: 236-447
Cow position: chr4:56513985-56514193 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 41

Conread position: 236-448
Cow position: chr4:25906369-25906578 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 198, 111

Conread position: 237-421
Cow position: chr4:2422541-2422356 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 91

Conread position: 237-423
Cow position: chr4:58947954-58948140 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 54

Conread position: 237-448
Cow position: chr4:12913840-12914056 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 60

Conread position: 238-439
Cow position: chr4:24415244-24415041 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 133

Conread position: 238-441
Cow position: chr4:3440363-3440158 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 65

Conread position: 239-376
Cow position: chr4:23758761-23758619 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 239-406
Cow position: chr4:45952419-45952585 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 121, 34

Conread position: 239-447
Cow position: chr4:52225961-52225755 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 121, 61

Conread position: 239-448
Cow position: chr4:26400918-26400702 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 189

Conread position: 239-448
Cow position: chr4:46082936-46083151 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 18

Conread position: 240-373
Cow position: chr4:23166860-23166724 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 123

Conread position: 240-404
Cow position: chr4:36929272-36929104 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 240-421
Cow position: chr4:11099714-11099895 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 70, 44

Conread position: 240-424
Cow position: chr4:31172630-31172441 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 240-438
Cow position: chr4:23311302-23311505 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 188

Conread position: 240-438
Cow position: chr4:49001340-49001546 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 240-441
Cow position: chr4:25972852-25972651 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 77

Conread position: 240-446
Cow position: chr4:6792391-6792189 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 122

Conread position: 240-447
Cow position: chr4:9815393-9815606 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 54

Conread position: 240-447
Cow position: chr4:35981948-35981735 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 240-447
Cow position: chr4:45918990-45918777 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 40, 174

Conread position: 240-448
Cow position: chr4:19584672-19584449 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 240-448
Cow position: chr4:23494879-23494678 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 64

Conread position: 240-448
Cow position: chr4:25879353-25879141 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 77

Conread position: 240-448
Cow position: chr4:27997638-27997430 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 44

Conread position: 240-448
Cow position: chr4:43542781-43542989 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 120, 47

Conread position: 240-448
Cow position: chr4:51784133-51783925 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 44

Conread position: 241-399
Cow position: chr4:30288273-30288119 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 49

Conread position: 241-405
Cow position: chr4:61171859-61171693 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 242-448
Cow position: chr4:36731149-36730935 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 245-403
Cow position: chr4:26541690-26541526 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 139
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 0

Conread position: 245-405
Cow position: chr4:47444819-47444975 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 25, 64

Conread position: 245-447
Cow position: chr4:19307210-19307002 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 32, 194

Conread position: 246-417
Cow position: chr4:68634909-68634741 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 154, 114

Conread position: 247-424
Cow position: chr4:46861648-46861821 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 97

Conread position: 252-377
Cow position: chr4:50769823-50769950 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 110

Conread position: 258-439
Cow position: chr4:24187681-24187861 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 102, 21

Conread position: 274-438
Cow position: chr4:48284008-48283847 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 152, 84

Conread position: 275-446
Cow position: chr4:61304503-61304677 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.