Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               121-231
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               121-311
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               122-228
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               122-230
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-237
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-293
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 108
               

               Conread position:
               122-327
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               122-438
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               67, 90
               

               Conread position:
               122-442
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 253
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 35
               

               Conread position:
               123-239
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               123-375
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               123-378
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               124-447
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               125-425
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               126-229
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               126-231
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               126-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               126-231
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               126-424
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               126-447
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               64, 223
               

               Conread position:
               126-449
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 262
               

               Conread position:
               137-239
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               138-423
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               144-351
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 135
               

               Conread position:
               145-448
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               8, 233
               

               Conread position:
               153-446
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               172-448
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               204-436
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 13
               

               Conread position:
               212-404
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               76, 99
               

               Conread position:
               217-448
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               219-421
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 151
               

               Conread position:
               219-447
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               220-448
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 184
               

               Conread position:
               221-342
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               221-447
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               226-435
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               226-436
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               226-447
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               15, 44
               

               Conread position:
               226-448
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               227-438
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               48, 114
               

               Conread position:
               229-436
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               197, 55
               

               Conread position:
               229-439
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               231-434
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               233-447
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               234-447
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               43, 130
               

               Conread position:
               235-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 173
               

               Conread position:
               236-406
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               236-423
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               236-446
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               236-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               236-455
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               237-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               238-406
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               239-404
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               239-406
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               239-439
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 55
               

               Conread position:
               240-370
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-380
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               240-385
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 44
               

               Conread position:
               240-402
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               240-405
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 122
               

               Conread position:
               240-406
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               240-419
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               240-421
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               240-422
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               240-423
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-424
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               240-424
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               240-425
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               37, 125
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 58
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               37, 187
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 116
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 188
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               242-441
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               35, 135
               

               Conread position:
               245-363
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               115, 45
               

               Conread position:
               245-424
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 138
               

               Conread position:
               245-438
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 181
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               245-448
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 109
               

               Conread position:
               247-447
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               253-387
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               268-424
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               22, 0
               
Show alignments to all cow chromosomes.