Cow genome map
| Conread name: | rhyp26c_h22.y1 |
| Conread position: | 119-231 |
| Cow position: | chr5:41637010-41636898 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 121-231 |
| Cow position: | chr5:2819402-2819288 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 121-311 |
| Cow position: | chr5:17403904-17404094 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 122-228 |
| Cow position: | chr5:67149875-67149984 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 122-230 |
| Cow position: | chr5:21194980-21195091 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-231 |
| Cow position: | chr5:3059062-3058950 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 122-231 |
| Cow position: | chr5:38629429-38629317 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 122-231 |
| Cow position: | chr5:51503146-51503034 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-231 |
| Cow position: | chr5:63188184-63188296 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 122-237 |
| Cow position: | chr5:3752994-3752877 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 68, 83 |
| Conread position: | 122-239 |
| Cow position: | chr5:73526509-73526389 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 122-242 |
| Cow position: | chr5:34279464-34279587 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-242 |
| Cow position: | chr5:58748912-58748786 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-242 |
| Cow position: | chr5:64399151-64399028 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 122-243 |
| Cow position: | chr5:30333093-30332969 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 122-245 |
| Cow position: | chr5:30978496-30978370 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 122-293 |
| Cow position: | chr5:41907172-41907000 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 108 |
| Conread position: | 122-327 |
| Cow position: | chr5:39442439-39442218 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 122-438 |
| Cow position: | chr5:31786364-31786041 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 67, 90 |
| Conread position: | 122-442 |
| Cow position: | chr5:23640874-23641208 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 253 |
| Conread position: | 122-447 |
| Cow position: | chr5:19905140-19905499 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 122-447 |
| Cow position: | chr5:56385356-56385006 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 35 |
| Conread position: | 123-239 |
| Cow position: | chr5:41604765-41604646 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 123-375 |
| Cow position: | chr5:34184365-34184107 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 123-378 |
| Cow position: | chr5:49655886-49656125 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 124-447 |
| Cow position: | chr5:46294548-46294886 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 125-425 |
| Cow position: | chr5:32269885-32269575 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 134 |
| Conread position: | 126-229 |
| Cow position: | chr5:21356750-21356857 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 126-231 |
| Cow position: | chr5:1343717-1343824 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 126-231 |
| Cow position: | chr5:36028007-36028118 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 126-231 |
| Cow position: | chr5:54533124-54533016 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 126-424 |
| Cow position: | chr5:26046461-26046137 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 126-447 |
| Cow position: | chr5:31604528-31604853 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 64, 223 |
| Conread position: | 126-449 |
| Cow position: | chr5:50425348-50425701 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 262 |
| Conread position: | 137-239 |
| Cow position: | chr5:22934328-22934431 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 138-423 |
| Cow position: | chr5:14154240-14153948 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 144-351 |
| Cow position: | chr5:40711319-40711533 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 135 |
| Conread position: | 145-448 |
| Cow position: | chr5:14538560-14538871 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 8, 233 |
| Conread position: | 153-446 |
| Cow position: | chr5:40927905-40928193 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 172-448 |
| Cow position: | chr5:65593926-65593659 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 204-436 |
| Cow position: | chr5:17028119-17027887 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 212-404 |
| Cow position: | chr5:53145869-53146063 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 76, 99 |
| Conread position: | 217-448 |
| Cow position: | chr5:3492206-3491979 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 219-421 |
| Cow position: | chr5:62142686-62142477 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 219-447 |
| Cow position: | chr5:45940603-45940828 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 144 |
| Conread position: | 220-448 |
| Cow position: | chr5:65924680-65924921 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 184 |
| Conread position: | 221-342 |
| Cow position: | chr5:36407168-36407041 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 221-447 |
| Cow position: | chr5:35209467-35209693 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 226-435 |
| Cow position: | chr5:27615518-27615308 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 226-436 |
| Cow position: | chr5:6987166-6986951 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 226-447 |
| Cow position: | chr5:41229711-41229491 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 226-448 |
| Cow position: | chr5:25899870-25900086 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 227-438 |
| Cow position: | chr5:43329692-43329905 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 114 |
| Conread position: | 229-436 |
| Cow position: | chr5:40234120-40233924 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 197, 55 |
| Conread position: | 229-439 |
| Cow position: | chr5:62026947-62027157 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 231-434 |
| Cow position: | chr5:26099380-26099579 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 233-447 |
| Cow position: | chr5:22934456-22934677 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 234-447 |
| Cow position: | chr5:56753722-56753506 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 235-448 |
| Cow position: | chr5:39695643-39695434 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 173 |
| Conread position: | 236-406 |
| Cow position: | chr5:64399006-64398828 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 236-423 |
| Cow position: | chr5:24361520-24361338 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 236-446 |
| Cow position: | chr5:9430470-9430679 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 236-447 |
| Cow position: | chr5:48535796-48535585 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 236-448 |
| Cow position: | chr5:18104148-18104373 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 236-448 |
| Cow position: | chr5:34921844-34922057 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 236-455 |
| Cow position: | chr5:54111913-54111689 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 237-448 |
| Cow position: | chr5:29505101-29504890 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 238-406 |
| Cow position: | chr5:66281397-66281233 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 238-447 |
| Cow position: | chr5:20974454-20974665 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 239-404 |
| Cow position: | chr5:42096607-42096451 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 35 |
| Conread position: | 239-406 |
| Cow position: | chr5:57127002-57126834 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 239-439 |
| Cow position: | chr5:31434250-31434054 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 239-448 |
| Cow position: | chr5:43858445-43858650 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 55 |
| Conread position: | 240-370 |
| Cow position: | chr5:39181923-39182057 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-380 |
| Cow position: | chr5:59356979-59356834 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 240-385 |
| Cow position: | chr5:37068878-37068734 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 240-402 |
| Cow position: | chr5:29979999-29980160 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 240-405 |
| Cow position: | chr5:7552430-7552596 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 122 |
| Conread position: | 240-406 |
| Cow position: | chr5:51314859-51315024 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 240-419 |
| Cow position: | chr5:35449235-35449062 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 240-421 |
| Cow position: | chr5:45037009-45036828 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 240-422 |
| Cow position: | chr5:22839484-22839666 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 240-423 |
| Cow position: | chr5:61488120-61488308 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 240-424 |
| Cow position: | chr5:17630890-17631066 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 122, 29 |
| Conread position: | 240-424 |
| Cow position: | chr5:32282324-32282134 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 240-425 |
| Cow position: | chr5:70581908-70582094 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 37, 125 |
| Conread position: | 240-436 |
| Cow position: | chr5:18898964-18898773 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 240-436 |
| Cow position: | chr5:48143797-48143998 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 240-441 |
| Cow position: | chr5:39442282-39442077 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 240-447 |
| Cow position: | chr5:1343866-1344080 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 240-447 |
| Cow position: | chr5:3058664-3058459 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 240-447 |
| Cow position: | chr5:9083328-9083116 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 240-447 |
| Cow position: | chr5:29560395-29560188 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 120, 31 |
| Conread position: | 240-447 |
| Cow position: | chr5:33467054-33467262 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 240-447 |
| Cow position: | chr5:39710830-39710618 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 40, 188 |
| Conread position: | 240-448 |
| Cow position: | chr5:28927601-28927815 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 240-448 |
| Cow position: | chr5:37713909-37714127 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 240-448 |
| Cow position: | chr5:72173014-72172801 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-441 |
| Cow position: | chr5:55989733-55989526 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 245-363 |
| Cow position: | chr5:42794898-42795013 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 245-424 |
| Cow position: | chr5:3649473-3649657 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 138 |
| Conread position: | 245-438 |
| Cow position: | chr5:23366783-23366979 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 181 |
| Conread position: | 245-447 |
| Cow position: | chr5:27007880-27007677 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 245-448 |
| Cow position: | chr5:27690076-27690281 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 109 |
| Conread position: | 247-447 |
| Cow position: | chr5:51502991-51502791 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 253-387 |
| Cow position: | chr5:54090008-54089879 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 268-424 |
| Cow position: | chr5:1276514-1276672 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.