Cow genome map
| Conread name: | rhyp26c_h22.y1 | 
| Conread position: | 119-422 | 
| Cow position: | chr6:28278835-28278505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 69, 18 | 
| Conread position: | 122-231 | 
| Cow position: | chr6:32798716-32798828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 122-231 | 
| Cow position: | chr6:54144459-54144347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 122-239 | 
| Cow position: | chr6:16733571-16733452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 67, 56 | 
| Conread position: | 122-241 | 
| Cow position: | chr6:50317888-50318010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 122-242 | 
| Cow position: | chr6:19427607-19427486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 67, 107 | 
| Conread position: | 122-246 | 
| Cow position: | chr6:6367515-6367643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 66, 94 | 
| Conread position: | 122-272 | 
| Cow position: | chr6:9026676-9026523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 67, 144 | 
| Conread position: | 122-368 | 
| Cow position: | chr6:40104842-40104605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 156, 69 | 
| Conread position: | 122-422 | 
| Cow position: | chr6:35703052-35703366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 58, 28 | 
| Conread position: | 122-424 | 
| Cow position: | chr6:8986250-8986565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 183 | 
| Conread position: | 122-436 | 
| Cow position: | chr6:10237490-10237178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 241 | 
| Conread position: | 122-438 | 
| Cow position: | chr6:29412632-29412959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 66, 249 | 
| Conread position: | 122-441 | 
| Cow position: | chr6:2324067-2324393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 67, 166 | 
| Conread position: | 122-447 | 
| Cow position: | chr6:52556342-52556681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 15, 29 | 
| Conread position: | 122-448 | 
| Cow position: | chr6:52002511-52002161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 67, 15 | 
| Conread position: | 123-231 | 
| Cow position: | chr6:827552-827663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 123-239 | 
| Cow position: | chr6:47192370-47192492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 65, 21 | 
| Conread position: | 123-323 | 
| Cow position: | chr6:41265266-41265065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 114, 42 | 
| Conread position: | 123-357 | 
| Cow position: | chr6:32817135-32816880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 66, 180 | 
| Conread position: | 123-358 | 
| Cow position: | chr6:37054140-37053881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 124-239 | 
| Cow position: | chr6:15997063-15997181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 124-375 | 
| Cow position: | chr6:32412485-32412745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 53, 181 | 
| Conread position: | 124-424 | 
| Cow position: | chr6:48806854-48807177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 50, 261 | 
| Conread position: | 124-438 | 
| Cow position: | chr6:11790130-11789801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 28, 214 | 
| Conread position: | 124-447 | 
| Cow position: | chr6:1907674-1907332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 125-447 | 
| Cow position: | chr6:38894960-38895282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 12 | 
| Conread position: | 126-228 | 
| Cow position: | chr6:30160471-30160366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 126-242 | 
| Cow position: | chr6:24558031-24557914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 126-438 | 
| Cow position: | chr6:16219913-16220223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 56 | 
| Conread position: | 127-421 | 
| Cow position: | chr6:10254377-10254061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 48, 242 | 
| Conread position: | 127-449 | 
| Cow position: | chr6:62345732-62346059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 61, 75 | 
| Conread position: | 129-423 | 
| Cow position: | chr6:40736855-40737147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 27, 63 | 
| Conread position: | 134-422 | 
| Cow position: | chr6:67437109-67436808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 68 | 
| Conread position: | 144-244 | 
| Cow position: | chr6:47326938-47327042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 163-440 | 
| Cow position: | chr6:65871967-65871699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 26, 36 | 
| Conread position: | 172-417 | 
| Cow position: | chr6:33985047-33984791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 17, 34 | 
| Conread position: | 201-446 | 
| Cow position: | chr6:47624919-47625165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 41, 57 | 
| Conread position: | 209-439 | 
| Cow position: | chr6:2582908-2582675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 13, 106 | 
| Conread position: | 217-448 | 
| Cow position: | chr6:48344357-48344120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 27, 16 | 
| Conread position: | 221-439 | 
| Cow position: | chr6:60153060-60152839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 18, 142 | 
| Conread position: | 221-448 | 
| Cow position: | chr6:54807249-54807015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 56, 32 | 
| Conread position: | 226-357 | 
| Cow position: | chr6:17669311-17669177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 226-385 | 
| Cow position: | chr6:55892788-55892619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 226-401 | 
| Cow position: | chr6:47204493-47204314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 21, 7 | 
| Conread position: | 226-404 | 
| Cow position: | chr6:52247206-52247029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 17, 59 | 
| Conread position: | 226-424 | 
| Cow position: | chr6:7824779-7824579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 49, 79 | 
| Conread position: | 226-448 | 
| Cow position: | chr6:13592722-13592502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 134, 64 | 
| Conread position: | 226-448 | 
| Cow position: | chr6:56376334-56376555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 13, 6 | 
| Conread position: | 228-438 | 
| Cow position: | chr6:827688-827904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 11, 70 | 
| Conread position: | 228-448 | 
| Cow position: | chr6:48572868-48573090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 18, 95 | 
| Conread position: | 229-441 | 
| Cow position: | chr6:47327052-47327269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 48, 138 | 
| Conread position: | 233-406 | 
| Cow position: | chr6:30474331-30474159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 22 | 
| Conread position: | 233-423 | 
| Cow position: | chr6:1890834-1891027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 9, 85 | 
| Conread position: | 236-342 | 
| Cow position: | chr6:61218021-61218133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 236-401 | 
| Cow position: | chr6:47026483-47026322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 59, 10 | 
| Conread position: | 236-406 | 
| Cow position: | chr6:1889084-1889249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 120, 44 | 
| Conread position: | 236-439 | 
| Cow position: | chr6:416105-415896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 71, 48 | 
| Conread position: | 236-447 | 
| Cow position: | chr6:12387318-12387530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 7, 125 | 
| Conread position: | 236-447 | 
| Cow position: | chr6:20379459-20379672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 6, 85 | 
| Conread position: | 236-447 | 
| Cow position: | chr6:60930892-60931107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 51, 60 | 
| Conread position: | 236-448 | 
| Cow position: | chr6:68112494-68112694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 188, 15 | 
| Conread position: | 236-462 | 
| Cow position: | chr6:6367662-6367880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 9, 95 | 
| Conread position: | 238-339 | 
| Cow position: | chr6:56860554-56860449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 238-424 | 
| Cow position: | chr6:3118191-3118379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 48, 105 | 
| Conread position: | 238-444 | 
| Cow position: | chr6:36652424-36652218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 5, 121 | 
| Conread position: | 239-405 | 
| Cow position: | chr6:37739192-37739023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 36, 127 | 
| Conread position: | 239-447 | 
| Cow position: | chr6:41265123-41264919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 121, 67 | 
| Conread position: | 239-447 | 
| Cow position: | chr6:63197162-63197378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 54, 102 | 
| Conread position: | 239-448 | 
| Cow position: | chr6:5958023-5958224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 121, 37 | 
| Conread position: | 240-397 | 
| Cow position: | chr6:36194596-36194432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 240-398 | 
| Cow position: | chr6:6994952-6995102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 35, 70 | 
| Conread position: | 240-421 | 
| Cow position: | chr6:24223155-24223340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 35, 126 | 
| Conread position: | 240-421 | 
| Cow position: | chr6:53932845-53933027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 40, 110 | 
| Conread position: | 240-423 | 
| Cow position: | chr6:16634215-16634401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 47, 134 | 
| Conread position: | 240-436 | 
| Cow position: | chr6:19427456-19427256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 37, 187 | 
| Conread position: | 240-439 | 
| Cow position: | chr6:55842154-55842357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 37, 107 | 
| Conread position: | 240-446 | 
| Cow position: | chr6:6731268-6731058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 24, 140 | 
| Conread position: | 240-446 | 
| Cow position: | chr6:24649854-24649642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 34, 16 | 
| Conread position: | 240-447 | 
| Cow position: | chr6:35415516-35415728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 35, 127 | 
| Conread position: | 240-447 | 
| Cow position: | chr6:44371944-44372150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 40, 107 | 
| Conread position: | 240-447 | 
| Cow position: | chr6:58316049-58315842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 35, 124 | 
| Conread position: | 240-448 | 
| Cow position: | chr6:8318161-8318374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 38, 122 | 
| Conread position: | 240-448 | 
| Cow position: | chr6:38614818-38614616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 66, 35 | 
| Conread position: | 242-448 | 
| Cow position: | chr6:3374567-3374777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 39, 171 | 
| Conread position: | 242-448 | 
| Cow position: | chr6:15242832-15242626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 114, 38 | 
| Conread position: | 245-343 | 
| Cow position: | chr6:59588409-59588514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 245-355 | 
| Cow position: | chr6:10237043-10237158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 245-388 | 
| Cow position: | chr6:65852549-65852689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 35, 51 | 
| Conread position: | 246-342 | 
| Cow position: | chr6:61322605-61322505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 246-380 | 
| Cow position: | chr6:30160314-30160181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 114, 27 | 
| Conread position: | 247-448 | 
| Cow position: | chr6:33851802-33851991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 30, 78 | 
| Conread position: | 249-424 | 
| Cow position: | chr6:20548990-20548817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 38, 71 | 
| Conread position: | 250-441 | 
| Cow position: | chr6:28811003-28811195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 110, 139 | 
| Conread position: | 253-435 | 
| Cow position: | chr6:64436332-64436522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 23, 138 | 
| Conread position: | 255-447 | 
| Cow position: | chr6:9026505-9026310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 22, 103 | 
| Conread position: | 256-439 | 
| Cow position: | chr6:55366334-55366520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 258-436 | 
| Cow position: | chr6:64427173-64426997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 59, 104 | 
| Conread position: | 274-422 | 
| Cow position: | chr6:10705804-10705950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 15, 87 | 
Show alignments to all cow chromosomes.
