Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               122-228
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               122-234
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               69, 91
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               65, 83
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-243
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               122-379
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               58, 214
               

               Conread position:
               122-424
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 112
               

               Conread position:
               122-439
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               67, 330
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 68
               

               Conread position:
               122-460
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               66, 315
               

               Conread position:
               123-230
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               123-231
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               123-316
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               123-372
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 264
               

               Conread position:
               123-436
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 270
               

               Conread position:
               124-272
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               126-436
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               126-446
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 102
               

               Conread position:
               126-447
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 298
               

               Conread position:
               127-380
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               48, 256
               

               Conread position:
               131-447
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 87
               

               Conread position:
               142-447
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               153-447
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               154-444
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 57
               

               Conread position:
               158-389
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               31, 181
               

               Conread position:
               162-438
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               114, 10
               

               Conread position:
               170-448
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               182-380
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 34
               

               Conread position:
               193-447
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               51, 148
               

               Conread position:
               204-447
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               209-450
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               217-421
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               221-424
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               221-448
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               225-448
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               226-357
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 13
               

               Conread position:
               226-423
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               226-436
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               120, 13
               

               Conread position:
               226-439
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               13, 140
               

               Conread position:
               227-448
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               232-447
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               233-389
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               236-381
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               236-424
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               236-439
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               236-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               237-435
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 44
               

               Conread position:
               237-448
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 198
               

               Conread position:
               238-401
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               238-412
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               238-448
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               239-405
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               239-436
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               239-437
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 46
               

               Conread position:
               240-406
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               240-419
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 123
               

               Conread position:
               240-419
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               240-421
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               37, 129
               

               Conread position:
               240-422
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               240-424
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               120, 104
               

               Conread position:
               240-434
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               46, 143
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               240-439
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 186
               

               Conread position:
               240-439
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               34, 135
               

               Conread position:
               240-440
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 186
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               119, 33
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               240-455
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               241-417
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 131
               

               Conread position:
               241-422
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               241-448
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 52
               

               Conread position:
               242-448
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               245-352
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               245-386
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               245-402
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 99
               

               Conread position:
               245-405
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               245-441
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 118
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               30, 151
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 64
               

               Conread position:
               245-448
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               247-381
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               247-424
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               247-447
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               247-448
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               248-393
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               250-439
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               263-438
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               265-437
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               87, 0
               
Show alignments to all cow chromosomes.