Cow genome map

Conread name: rhyp26c_h22.y1

Conread position: 119-225
Cow position: chr7:55714232-55714124 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 29

Conread position: 122-228
Cow position: chr7:39603480-39603371 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 122-231
Cow position: chr7:37906203-37906315 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 122-231
Cow position: chr7:40192909-40192790 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 122-231
Cow position: chr7:41728100-41727990 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 122-234
Cow position: chr7:19423720-19423606 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 91

Conread position: 122-239
Cow position: chr7:36746483-36746365 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 83

Conread position: 122-242
Cow position: chr7:12754997-12755120 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 122-242
Cow position: chr7:25914330-25914455 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 122-242
Cow position: chr7:62102752-62102629 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 122-243
Cow position: chr7:20108835-20108958 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 102

Conread position: 122-379
Cow position: chr7:64104867-64104604 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 214

Conread position: 122-424
Cow position: chr7:10345309-10345612 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 112

Conread position: 122-439
Cow position: chr7:11872446-11872792 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 330

Conread position: 122-447
Cow position: chr7:26665410-26665762 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 122-447
Cow position: chr7:58774043-58773699 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 68

Conread position: 122-460
Cow position: chr7:47874828-47875187 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 66, 315

Conread position: 123-230
Cow position: chr7:26907880-26907987 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 21

Conread position: 123-231
Cow position: chr7:5249756-5249867 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 123-316
Cow position: chr7:20176236-20176445 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 148

Conread position: 123-372
Cow position: chr7:44442505-44442781 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 264

Conread position: 123-436
Cow position: chr7:59246113-59245772 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 61, 270

Conread position: 124-272
Cow position: chr7:35504699-35504541 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 126-436
Cow position: chr7:20356103-20355767 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 76

Conread position: 126-446
Cow position: chr7:64139989-64140329 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 102

Conread position: 126-447
Cow position: chr7:68868240-68867904 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 298

Conread position: 127-380
Cow position: chr7:31881814-31881541 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 256

Conread position: 131-447
Cow position: chr7:27349123-27349429 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 87

Conread position: 142-447
Cow position: chr7:10942725-10943060 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 153-447
Cow position: chr7:17816843-17816553 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 15

Conread position: 154-444
Cow position: chr7:26012515-26012222 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 57

Conread position: 158-389
Cow position: chr7:62006061-62006325 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 181

Conread position: 162-438
Cow position: chr7:34716326-34716051 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 10

Conread position: 170-448
Cow position: chr7:39042670-39042398 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 31

Conread position: 182-380
Cow position: chr7:45955986-45955790 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 34

Conread position: 193-447
Cow position: chr7:34199393-34199120 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 148

Conread position: 204-447
Cow position: chr7:40758192-40758451 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 13

Conread position: 209-450
Cow position: chr7:20444-20193 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 11

Conread position: 217-421
Cow position: chr7:40991733-40991529 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 87

Conread position: 221-424
Cow position: chr7:19896791-19896986 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 89

Conread position: 221-448
Cow position: chr7:58170763-58170535 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 23, 100

Conread position: 225-448
Cow position: chr7:52532814-52533026 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 226-357
Cow position: chr7:2744528-2744662 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 13

Conread position: 226-423
Cow position: chr7:14079149-14079347 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 85

Conread position: 226-436
Cow position: chr7:1733179-1733388 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 120, 13

Conread position: 226-439
Cow position: chr7:23177556-23177340 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 13, 140

Conread position: 227-448
Cow position: chr7:61425573-61425358 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 12

Conread position: 232-447
Cow position: chr7:51666434-51666641 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 92

Conread position: 233-389
Cow position: chr7:8826829-8826672 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 83

Conread position: 236-381
Cow position: chr7:32769274-32769423 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 93

Conread position: 236-424
Cow position: chr7:32478601-32478414 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 72

Conread position: 236-439
Cow position: chr7:32277550-32277351 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 9, 71

Conread position: 236-447
Cow position: chr7:68753678-68753892 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 169
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 7, 129

Conread position: 236-448
Cow position: chr7:23679582-23679801 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 236-448
Cow position: chr7:63749470-63749685 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 124, 43

Conread position: 237-435
Cow position: chr7:40916593-40916393 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 44

Conread position: 237-448
Cow position: chr7:40192755-40192533 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 198

Conread position: 238-401
Cow position: chr7:50492838-50493002 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 95

Conread position: 238-412
Cow position: chr7:23256850-23257026 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 43

Conread position: 238-447
Cow position: chr7:21197374-21197584 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 8, 69

Conread position: 238-447
Cow position: chr7:36129009-36128792 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 238-448
Cow position: chr7:61551907-61551706 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 63

Conread position: 239-405
Cow position: chr7:40213361-40213193 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 126

Conread position: 239-436
Cow position: chr7:19399674-19399866 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 239-437
Cow position: chr7:57318291-57318475 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 46

Conread position: 240-406
Cow position: chr7:66335756-66335920 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 58

Conread position: 240-419
Cow position: chr7:32372863-32372684 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 123

Conread position: 240-419
Cow position: chr7:39401964-39401780 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 240-421
Cow position: chr7:22153165-22152976 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 129

Conread position: 240-422
Cow position: chr7:26195798-26195964 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 37

Conread position: 240-424
Cow position: chr7:37817843-37818027 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 120, 104

Conread position: 240-434
Cow position: chr7:40727198-40726998 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 143

Conread position: 240-436
Cow position: chr7:50108277-50108476 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 240-439
Cow position: chr7:3311848-3311646 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 186

Conread position: 240-439
Cow position: chr7:51248864-51249071 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 135

Conread position: 240-440
Cow position: chr7:23131602-23131399 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 240-441
Cow position: chr7:39444599-39444800 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 25

Conread position: 240-447
Cow position: chr7:53743895-53744107 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 186

Conread position: 240-448
Cow position: chr7:4418457-4418672 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 240-448
Cow position: chr7:13985316-13985520 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 70

Conread position: 240-448
Cow position: chr7:37364795-37364592 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 119, 33

Conread position: 240-448
Cow position: chr7:52751894-52752098 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 120, 39

Conread position: 240-455
Cow position: chr7:45709199-45709421 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 37, 0

Conread position: 241-417
Cow position: chr7:43234438-43234619 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 131

Conread position: 241-422
Cow position: chr7:54855570-54855388 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 74

Conread position: 241-448
Cow position: chr7:2172753-2172551 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 52

Conread position: 242-448
Cow position: chr7:44589848-44590052 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 56

Conread position: 245-352
Cow position: chr7:46327766-46327876 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 95
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 94

Conread position: 245-386
Cow position: chr7:47172709-47172851 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 245-402
Cow position: chr7:58490074-58489922 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 99

Conread position: 245-405
Cow position: chr7:51884501-51884666 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 245-441
Cow position: chr7:55076699-55076896 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 118

Conread position: 245-447
Cow position: chr7:3322800-3322593 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 30, 151

Conread position: 245-447
Cow position: chr7:43215507-43215307 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 64

Conread position: 245-448
Cow position: chr7:26501466-26501663 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 31, 113

Conread position: 247-381
Cow position: chr7:38068196-38068057 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 53

Conread position: 247-424
Cow position: chr7:18858343-18858161 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 247-447
Cow position: chr7:19616704-19616900 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 118

Conread position: 247-448
Cow position: chr7:59713468-59713259 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 248-393
Cow position: chr7:8261024-8261174 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 127
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 250-439
Cow position: chr7:36746316-36746124 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 8

Conread position: 263-438
Cow position: chr7:41727916-41727743 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 13

Conread position: 265-437
Cow position: chr7:48289340-48289173 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.