Cow genome map

Conread name: rhyp26c_h22.y1

Conread position: 119-394
Cow position: chr8:61123192-61123485 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 64

Conread position: 120-231
Cow position: chr8:942940-942825 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 100
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 122-228
Cow position: chr8:11249353-11249462 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 122-230
Cow position: chr8:13900527-13900414 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 122-231
Cow position: chr8:7671466-7671359 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 122-231
Cow position: chr8:24547143-24547031 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 122-231
Cow position: chr8:46640210-46640321 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 69, 23

Conread position: 122-234
Cow position: chr8:36471667-36471553 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 26

Conread position: 122-239
Cow position: chr8:45586296-45586415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 23

Conread position: 122-242
Cow position: chr8:28221439-28221562 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 122-245
Cow position: chr8:48763672-48763549 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 11

Conread position: 122-357
Cow position: chr8:29936045-29935814 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 56

Conread position: 122-375
Cow position: chr8:36505502-36505237 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 15

Conread position: 122-425
Cow position: chr8:24909714-24909401 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 67, 80

Conread position: 122-436
Cow position: chr8:31317639-31317317 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 80

Conread position: 122-447
Cow position: chr8:24934244-24933916 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 35

Conread position: 122-447
Cow position: chr8:32491656-32491322 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 71

Conread position: 123-240
Cow position: chr8:27053476-27053593 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 114

Conread position: 123-291
Cow position: chr8:37007690-37007870 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 123-405
Cow position: chr8:11896330-11896025 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 212

Conread position: 124-239
Cow position: chr8:44704216-44704093 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 124-448
Cow position: chr8:9962473-9962810 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 33

Conread position: 125-231
Cow position: chr8:25573163-25573054 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 95
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 126-228
Cow position: chr8:13976014-13975909 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 126-358
Cow position: chr8:49300480-49300743 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 78

Conread position: 134-242
Cow position: chr8:43693324-43693213 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 142-420
Cow position: chr8:60455259-60454988 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 58

Conread position: 142-450
Cow position: chr8:22103091-22103421 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 240

Conread position: 146-448
Cow position: chr8:29416268-29416571 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 37, 56

Conread position: 147-424
Cow position: chr8:43904872-43904570 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 42, 0

Conread position: 152-438
Cow position: chr8:19429777-19430068 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 53

Conread position: 163-422
Cow position: chr8:31253860-31253602 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 11

Conread position: 181-376
Cow position: chr8:21282102-21281898 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 32

Conread position: 201-422
Cow position: chr8:47678526-47678313 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 10, 17

Conread position: 206-441
Cow position: chr8:39936519-39936272 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 6

Conread position: 210-437
Cow position: chr8:30135925-30135690 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 7

Conread position: 212-424
Cow position: chr8:46203269-46203073 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 57

Conread position: 213-448
Cow position: chr8:32984101-32984345 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 138

Conread position: 214-421
Cow position: chr8:39555980-39555769 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 219-448
Cow position: chr8:20311519-20311296 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 29

Conread position: 221-416
Cow position: chr8:59507084-59507287 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 83

Conread position: 226-337
Cow position: chr8:31815060-31815173 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 14

Conread position: 226-436
Cow position: chr8:25871714-25871502 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 125

Conread position: 226-448
Cow position: chr8:3015464-3015234 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 6, 182

Conread position: 226-448
Cow position: chr8:9811784-9811555 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 9

Conread position: 227-354
Cow position: chr8:27053614-27053742 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 50, 12

Conread position: 227-448
Cow position: chr8:24237739-24237520 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 134

Conread position: 230-405
Cow position: chr8:38248712-38248888 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 72

Conread position: 233-458
Cow position: chr8:34410430-34410206 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 72

Conread position: 235-448
Cow position: chr8:48763535-48763326 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 11, 75

Conread position: 236-357
Cow position: chr8:29390681-29390557 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 106

Conread position: 236-397
Cow position: chr8:3147565-3147733 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 114

Conread position: 236-398
Cow position: chr8:47295958-47295791 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 236-447
Cow position: chr8:42578100-42578310 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 65

Conread position: 237-449
Cow position: chr8:45686457-45686666 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 43

Conread position: 238-422
Cow position: chr8:11225673-11225856 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 10

Conread position: 238-439
Cow position: chr8:29947184-29947373 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 238-447
Cow position: chr8:32079718-32079921 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 44

Conread position: 239-379
Cow position: chr8:9985584-9985444 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 38

Conread position: 239-421
Cow position: chr8:28884800-28884618 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 17

Conread position: 239-422
Cow position: chr8:35436640-35436824 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 36, 125

Conread position: 239-447
Cow position: chr8:8901996-8902206 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 110, 38

Conread position: 239-447
Cow position: chr8:31313869-31313656 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 30

Conread position: 239-460
Cow position: chr8:24546499-24546282 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 184, 104

Conread position: 240-402
Cow position: chr8:40549640-40549796 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 16

Conread position: 240-404
Cow position: chr8:42575670-42575503 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 37, 119

Conread position: 240-421
Cow position: chr8:38893981-38893801 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 132

Conread position: 240-436
Cow position: chr8:25573026-25572827 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 37, 122

Conread position: 240-439
Cow position: chr8:12538638-12538823 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 105

Conread position: 240-439
Cow position: chr8:51959428-51959632 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 124

Conread position: 240-440
Cow position: chr8:36505350-36505140 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 130

Conread position: 240-441
Cow position: chr8:1840918-1841119 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 44

Conread position: 240-441
Cow position: chr8:50953536-50953335 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 86

Conread position: 240-441
Cow position: chr8:51361530-51361329 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 120, 67

Conread position: 240-447
Cow position: chr8:13975865-13975662 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 120, 50

Conread position: 240-447
Cow position: chr8:44704060-44703854 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 73, 29

Conread position: 240-448
Cow position: chr8:54195507-54195302 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 154, 51

Conread position: 241-422
Cow position: chr8:28221592-28221776 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 154
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 46, 179

Conread position: 241-423
Cow position: chr8:59438310-59438494 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 67, 43

Conread position: 241-439
Cow position: chr8:11606300-11606108 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 36

Conread position: 242-438
Cow position: chr8:49687248-49687451 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 244-421
Cow position: chr8:29262744-29262575 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 116, 40

Conread position: 244-424
Cow position: chr8:34287893-34287715 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 40

Conread position: 244-447
Cow position: chr8:11638099-11637887 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 33, 5

Conread position: 245-403
Cow position: chr8:20131798-20131634 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 245-423
Cow position: chr8:52195887-52195709 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 72

Conread position: 245-438
Cow position: chr8:47483953-47484146 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 104

Conread position: 245-439
Cow position: chr8:26228921-26228732 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 139

Conread position: 245-444
Cow position: chr8:49265338-49265542 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 102

Conread position: 245-447
Cow position: chr8:29028112-29028318 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 176

Conread position: 246-378
Cow position: chr8:13738467-13738331 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 129

Conread position: 246-422
Cow position: chr8:58385638-58385459 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 29, 121

Conread position: 246-447
Cow position: chr8:42139079-42139278 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 115

Conread position: 247-447
Cow position: chr8:18220762-18220962 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 141, 113

Conread position: 247-448
Cow position: chr8:8010865-8010667 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 187, 63

Conread position: 248-427
Cow position: chr8:31690771-31690587 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 249-436
Cow position: chr8:44664613-44664806 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 250-392
Cow position: chr8:9624722-9624580 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 34

Conread position: 253-448
Cow position: chr8:8134542-8134745 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 260-448
Cow position: chr8:52863764-52863575 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 89

Conread position: 283-436
Cow position: chr8:37007987-37008135 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 289-426
Cow position: chr8:41640692-41640832 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.