Cow genome map


           Conread name:
           rhyp26c_h22.y1
        

               Conread position:
               119-394
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 64
               

               Conread position:
               120-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               122-228
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-230
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               122-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               122-234
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               122-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               122-242
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               122-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               122-357
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               60, 56
               

               Conread position:
               122-375
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               122-425
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               122-436
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 80
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               122-447
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               123-240
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 114
               

               Conread position:
               123-291
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               123-405
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               67, 212
               

               Conread position:
               124-239
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               124-448
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               125-231
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               126-228
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               126-358
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               134-242
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               142-420
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               142-450
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 240
               

               Conread position:
               146-448
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               37, 56
               

               Conread position:
               147-424
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               152-438
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               163-422
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               181-376
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               201-422
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               206-441
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               210-437
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               212-424
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               213-448
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 138
               

               Conread position:
               214-421
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               219-448
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 29
               

               Conread position:
               221-416
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               226-337
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               226-436
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               49, 125
               

               Conread position:
               226-448
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               6, 182
               

               Conread position:
               226-448
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               227-354
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               227-448
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               5, 134
               

               Conread position:
               230-405
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               233-458
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 72
               

               Conread position:
               235-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               236-357
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               236-397
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 114
               

               Conread position:
               236-398
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               236-447
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               237-449
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               238-422
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 10
               

               Conread position:
               238-439
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               238-447
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 44
               

               Conread position:
               239-379
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               239-421
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               239-422
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               36, 125
               

               Conread position:
               239-447
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               239-447
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               239-460
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               184, 104
               

               Conread position:
               240-402
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               240-404
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               37, 119
               

               Conread position:
               240-421
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               55, 132
               

               Conread position:
               240-436
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 122
               

               Conread position:
               240-439
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               240-439
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               240-440
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 130
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               240-441
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               120, 67
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               120, 50
               

               Conread position:
               240-447
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               240-448
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               154, 51
               

               Conread position:
               241-422
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               46, 179
               

               Conread position:
               241-423
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               241-439
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               242-438
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               244-421
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               116, 40
               

               Conread position:
               244-424
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               115, 40
               

               Conread position:
               244-447
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               245-403
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               245-423
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               245-438
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 104
               

               Conread position:
               245-439
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               115, 139
               

               Conread position:
               245-444
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 102
               

               Conread position:
               245-447
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               246-378
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 129
               

               Conread position:
               246-422
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 121
               

               Conread position:
               246-447
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               41, 115
               

               Conread position:
               247-447
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               141, 113
               

               Conread position:
               247-448
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               187, 63
               

               Conread position:
               248-427
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               249-436
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               250-392
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 34
               

               Conread position:
               253-448
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               260-448
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               283-436
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               289-426
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 0
               
Show alignments to all cow chromosomes.