Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 323-583 |
| Cow position: | chr10:16669062-16668806 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 332-554 |
| Cow position: | chr10:37092797-37092577 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 334-574 |
| Cow position: | chr10:15824234-15824002 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 335-493 |
| Cow position: | chr10:27223064-27223220 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 335-566 |
| Cow position: | chr10:17745409-17745631 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 335-584 |
| Cow position: | chr10:11275961-11276204 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 335-584 |
| Cow position: | chr10:23879869-23879621 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 335-584 |
| Cow position: | chr10:35181981-35182227 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 335-584 |
| Cow position: | chr10:43060800-43060558 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 80 |
| Conread position: | 335-584 |
| Cow position: | chr10:47583987-47584225 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 335-584 |
| Cow position: | chr10:52131862-52132101 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 339-584 |
| Cow position: | chr10:37665293-37665049 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 340-569 |
| Cow position: | chr10:68203790-68203562 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 340-584 |
| Cow position: | chr10:767489-767254 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 340-584 |
| Cow position: | chr10:18863172-18863407 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 340-584 |
| Cow position: | chr10:22455488-22455723 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 117 |
| Conread position: | 340-584 |
| Cow position: | chr10:41638088-41638330 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 341-491 |
| Cow position: | chr10:17415593-17415440 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 341-574 |
| Cow position: | chr10:24609080-24609314 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 341-584 |
| Cow position: | chr10:19128503-19128255 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 341-584 |
| Cow position: | chr10:37428382-37428148 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 342-583 |
| Cow position: | chr10:2711437-2711201 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 343-584 |
| Cow position: | chr10:15618134-15617910 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 344-584 |
| Cow position: | chr10:12199313-12199556 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 345-583 |
| Cow position: | chr10:3318183-3318417 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 347-581 |
| Cow position: | chr10:5422076-5421843 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 348-584 |
| Cow position: | chr10:67051199-67051428 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 353-561 |
| Cow position: | chr10:57404360-57404161 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 355-584 |
| Cow position: | chr10:63621558-63621335 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 362-547 |
| Cow position: | chr10:48193377-48193195 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 362-583 |
| Cow position: | chr10:54342983-54342765 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 364-530 |
| Cow position: | chr10:68979852-68980010 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 371-578 |
| Cow position: | chr10:45195697-45195896 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 375-584 |
| Cow position: | chr10:31220496-31220701 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 150, 24 |
| Conread position: | 381-584 |
| Cow position: | chr10:60243958-60244153 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 415-553 |
| Cow position: | chr10:29487243-29487381 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 415-581 |
| Cow position: | chr10:62629707-62629864 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 417-584 |
| Cow position: | chr10:25536403-25536572 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 438-583 |
| Cow position: | chr10:30320811-30320947 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.