Cow genome map


           Conread name:
           rjca18c_c23.y1
        

               Conread position:
               303-544
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 217
               

               Conread position:
               334-493
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 80
               

               Conread position:
               334-583
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 61
               

               Conread position:
               335-514
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               335-543
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               335-544
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 118
               

               Conread position:
               335-572
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 123
               

               Conread position:
               335-576
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               335-577
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 96
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               64, 119
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 81
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               173, 44
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               338-583
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               340-545
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 122
               

               Conread position:
               340-557
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               340-558
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               340-576
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               340-577
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               340-580
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               340-581
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               59, 64
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 114
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               341-578
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 89
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               341-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 73
               

               Conread position:
               341-584
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               343-578
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               56, 104
               

               Conread position:
               344-566
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 211
               

               Conread position:
               344-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               54, 45
               

               Conread position:
               346-584
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 128
               

               Conread position:
               348-549
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               348-568
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               353-581
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               354-583
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               360-582
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               361-559
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               361-575
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               370-566
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               376-581
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               377-584
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               382-582
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               20, 193
               

               Conread position:
               395-582
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               398-578
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               417-565
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               421-533
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               426-583
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 6
               

               Conread position:
               429-569
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               439-584
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               100, 71
               
Show alignments to all cow chromosomes.