Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 334-518 |
| Cow position: | chr12:8767353-8767174 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 334-577 |
| Cow position: | chr12:33277336-33277100 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 335-497 |
| Cow position: | chr12:26310816-26310658 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 335-569 |
| Cow position: | chr12:1993296-1993060 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 335-570 |
| Cow position: | chr12:7025169-7024934 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 335-578 |
| Cow position: | chr12:27423537-27423775 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 335-580 |
| Cow position: | chr12:10161676-10161427 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 234 |
| Conread position: | 335-582 |
| Cow position: | chr12:16961876-16962122 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 127, 24 |
| Conread position: | 335-584 |
| Cow position: | chr12:5896798-5896543 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 335-584 |
| Cow position: | chr12:7086386-7086625 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 335-584 |
| Cow position: | chr12:11306360-11306111 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 81 |
| Conread position: | 335-584 |
| Cow position: | chr12:20227100-20226856 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 335-584 |
| Cow position: | chr12:28214378-28214617 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 340-580 |
| Cow position: | chr12:36975137-36974908 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 340-584 |
| Cow position: | chr12:7936787-7936555 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 341-582 |
| Cow position: | chr12:2837967-2837738 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 341-583 |
| Cow position: | chr12:38223264-38223016 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 178 |
| Conread position: | 345-583 |
| Cow position: | chr12:23499105-23499340 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 350-553 |
| Cow position: | chr12:12763916-12763717 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 356-582 |
| Cow position: | chr12:33350640-33350856 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 370-583 |
| Cow position: | chr12:34475917-34476119 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 370-584 |
| Cow position: | chr12:29759176-29758962 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 375-583 |
| Cow position: | chr12:8467874-8467669 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 395-584 |
| Cow position: | chr12:42854109-42854289 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 415-584 |
| Cow position: | chr12:27111234-27111396 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 416-579 |
| Cow position: | chr12:29801548-29801711 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 70 |
| Conread position: | 419-584 |
| Cow position: | chr12:25514457-25514624 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 435-583 |
| Cow position: | chr12:20792170-20792021 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 86 |
Show alignments to all cow chromosomes.