Cow genome map


           Conread name:
           rjca18c_c23.y1
        

               Conread position:
               323-584
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               334-500
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               334-527
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               334-527
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               334-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 125
               

               Conread position:
               335-544
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               64, 111
               

               Conread position:
               335-559
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               200, 60
               

               Conread position:
               335-564
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               335-573
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 124
               

               Conread position:
               335-577
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               335-578
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               335-580
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 117
               

               Conread position:
               335-581
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               116, 175
               

               Conread position:
               335-583
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               64, 127
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 119
               

               Conread position:
               336-486
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               339-579
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               199, 26
               

               Conread position:
               340-579
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 139
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 100
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               341-491
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               341-493
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 117
               

               Conread position:
               341-569
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               341-575
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               342-584
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               344-582
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 64
               

               Conread position:
               345-584
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               353-584
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               354-581
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               355-576
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               361-551
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               361-584
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               363-572
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               375-557
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               394-581
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 22
               

               Conread position:
               394-584
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               415-584
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               416-584
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 36
               

               Conread position:
               429-583
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               429-584
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               133, 22
               

               Conread position:
               431-584
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               434-584
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               463-583
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.