Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 316-519 |
| Cow position: | chr14:42258701-42258502 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 317-584 |
| Cow position: | chr14:22046584-22046335 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 334-520 |
| Cow position: | chr14:46980288-46980468 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 334-584 |
| Cow position: | chr14:47880393-47880639 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 335-495 |
| Cow position: | chr14:24783433-24783591 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 335-534 |
| Cow position: | chr14:44886277-44886082 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 335-549 |
| Cow position: | chr14:24738973-24738755 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 335-553 |
| Cow position: | chr14:42693370-42693158 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 59 |
| Conread position: | 335-556 |
| Cow position: | chr14:41712739-41712532 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 115, 33 |
| Conread position: | 335-581 |
| Cow position: | chr14:17556362-17556117 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 64, 113 |
| Conread position: | 335-582 |
| Cow position: | chr14:28007332-28007097 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 335-583 |
| Cow position: | chr14:37983682-37983922 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 335-584 |
| Cow position: | chr14:15011750-15011998 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 64, 146 |
| Conread position: | 335-584 |
| Cow position: | chr14:30134115-30134365 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 335-584 |
| Cow position: | chr14:35605591-35605835 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 340-498 |
| Cow position: | chr14:21864287-21864445 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 59, 144 |
| Conread position: | 340-565 |
| Cow position: | chr14:15662501-15662723 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 53 |
| Conread position: | 340-582 |
| Cow position: | chr14:34912231-34912466 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 340-583 |
| Cow position: | chr14:19735040-19735282 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 59, 75 |
| Conread position: | 341-584 |
| Cow position: | chr14:17051294-17051058 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 5 |
| Conread position: | 342-584 |
| Cow position: | chr14:25994305-25994539 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 344-511 |
| Cow position: | chr14:19339976-19340139 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 344-574 |
| Cow position: | chr14:24193043-24192819 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 345-584 |
| Cow position: | chr14:40243891-40243650 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 348-584 |
| Cow position: | chr14:44454155-44453927 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 351-514 |
| Cow position: | chr14:9500204-9500358 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 353-584 |
| Cow position: | chr14:38722572-38722352 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 372-584 |
| Cow position: | chr14:36420352-36420555 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 372-584 |
| Cow position: | chr14:50650237-50650023 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 376-556 |
| Cow position: | chr14:32574838-32574653 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 23 |
| Conread position: | 381-572 |
| Cow position: | chr14:38000078-37999896 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 18, 35 |
| Conread position: | 387-584 |
| Cow position: | chr14:35685425-35685616 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 398-582 |
| Cow position: | chr14:10949843-10950022 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 415-557 |
| Cow position: | chr14:44771726-44771588 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 455-584 |
| Cow position: | chr14:29481207-29481336 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.