Cow genome map


           Conread name:
           rjca18c_c23.y1
        

               Conread position:
               325-584
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               330-504
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               6, 117
               

               Conread position:
               334-582
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               65, 138
               

               Conread position:
               335-474
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               335-564
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               335-580
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               335-581
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               64, 117
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 127
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 116
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 131
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               338-583
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               340-556
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               340-567
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               340-581
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               340-583
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               340-583
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               60, 75
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               353-584
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               354-530
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               355-542
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               356-533
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               359-584
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               371-580
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 18
               

               Conread position:
               371-583
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 75
               

               Conread position:
               372-584
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               373-584
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               375-583
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               389-584
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               10, 56
               

               Conread position:
               391-533
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               393-584
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               6, 36
               
Show alignments to all cow chromosomes.