Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 325-584 |
| Cow position: | chr16:2722743-2722482 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 330-504 |
| Cow position: | chr16:608575-608404 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 6, 117 |
| Conread position: | 334-582 |
| Cow position: | chr16:52650203-52649961 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 335-474 |
| Cow position: | chr16:42406176-42406318 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 335-564 |
| Cow position: | chr16:2371481-2371269 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 335-580 |
| Cow position: | chr16:22785718-22785487 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 335-581 |
| Cow position: | chr16:23034980-23034740 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 335-582 |
| Cow position: | chr16:23301652-23301892 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 335-584 |
| Cow position: | chr16:16118772-16119021 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 335-584 |
| Cow position: | chr16:41680447-41680199 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 335-584 |
| Cow position: | chr16:43850516-43850267 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 116 |
| Conread position: | 335-584 |
| Cow position: | chr16:47781610-47781863 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 131 |
| Conread position: | 335-584 |
| Cow position: | chr16:48894506-48894264 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 335-584 |
| Cow position: | chr16:56373561-56373321 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 338-583 |
| Cow position: | chr16:37508403-37508641 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 340-556 |
| Cow position: | chr16:23878665-23878885 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 340-567 |
| Cow position: | chr16:30572308-30572080 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 340-581 |
| Cow position: | chr16:15509256-15509489 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 340-583 |
| Cow position: | chr16:14799417-14799180 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 340-583 |
| Cow position: | chr16:45057729-45057974 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 340-584 |
| Cow position: | chr16:37441589-37441352 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 353-584 |
| Cow position: | chr16:4854631-4854413 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 354-530 |
| Cow position: | chr16:9703280-9703101 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 355-542 |
| Cow position: | chr16:30109494-30109306 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 356-533 |
| Cow position: | chr16:37526991-37527162 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 359-584 |
| Cow position: | chr16:24038431-24038659 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 371-580 |
| Cow position: | chr16:5131428-5131222 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 371-583 |
| Cow position: | chr16:12243193-12242992 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 372-584 |
| Cow position: | chr16:43850162-43849959 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 373-584 |
| Cow position: | chr16:53547260-53547056 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 36 |
| Conread position: | 375-583 |
| Cow position: | chr16:32352472-32352675 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 389-584 |
| Cow position: | chr16:14084781-14084589 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 391-533 |
| Cow position: | chr16:29204517-29204378 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 393-584 |
| Cow position: | chr16:31374535-31374345 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 6, 36 |
Show alignments to all cow chromosomes.