Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 1-330 |
| Cow position: | chr18:17436162-17435827 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 334-584 |
| Cow position: | chr18:49436633-49436881 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 335-529 |
| Cow position: | chr18:23316490-23316298 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 65, 112 |
| Conread position: | 335-581 |
| Cow position: | chr18:50880767-50881011 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 335-584 |
| Cow position: | chr18:1700874-1701112 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 335-584 |
| Cow position: | chr18:32860936-32861180 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 335-584 |
| Cow position: | chr18:53047771-53047525 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 127 |
| Conread position: | 340-485 |
| Cow position: | chr18:31394011-31394159 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 340-569 |
| Cow position: | chr18:22433499-22433266 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 340-583 |
| Cow position: | chr18:28085864-28086106 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 340-584 |
| Cow position: | chr18:21123233-21123001 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 340-584 |
| Cow position: | chr18:24664154-24663918 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 340-584 |
| Cow position: | chr18:29081304-29081541 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 121 |
| Conread position: | 340-584 |
| Cow position: | chr18:50242348-50242587 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 341-495 |
| Cow position: | chr18:35471515-35471355 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 341-584 |
| Cow position: | chr18:16259553-16259795 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 118 |
| Conread position: | 341-584 |
| Cow position: | chr18:25846743-25846507 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 344-527 |
| Cow position: | chr18:22065072-22064892 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 372-584 |
| Cow position: | chr18:39474954-39474737 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 97 |
| Conread position: | 373-584 |
| Cow position: | chr18:27405212-27405414 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 379-584 |
| Cow position: | chr18:1129229-1129421 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 387-553 |
| Cow position: | chr18:8170755-8170922 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 393-580 |
| Cow position: | chr18:5060197-5060009 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 396-583 |
| Cow position: | chr18:52870955-52871137 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 406-584 |
| Cow position: | chr18:36456393-36456568 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 467-583 |
| Cow position: | chr18:32371708-32371592 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.