Cow genome map

Conread name: rjca18c_c23.y1

Conread position: 335-523
Cow position: chr2:20281814-20281998 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 123

Conread position: 335-571
Cow position: chr2:53716662-53716436 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 33

Conread position: 335-576
Cow position: chr2:3544279-3544045 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 79

Conread position: 335-579
Cow position: chr2:80604011-80603768 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 128

Conread position: 335-582
Cow position: chr2:40370446-40370217 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 78

Conread position: 335-583
Cow position: chr2:3182200-3181953 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 18

Conread position: 335-583
Cow position: chr2:46130613-46130368 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 13

Conread position: 335-584
Cow position: chr2:7779159-7778923 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 114

Conread position: 335-584
Cow position: chr2:9043520-9043759 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 113, 60

Conread position: 335-584
Cow position: chr2:18274347-18274100 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 126

Conread position: 335-584
Cow position: chr2:21697398-21697162 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 84

Conread position: 335-584
Cow position: chr2:63287827-63287591 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 116

Conread position: 335-584
Cow position: chr2:74387804-74387563 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 117, 59

Conread position: 337-565
Cow position: chr2:38583603-38583375 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 9, 103

Conread position: 340-499
Cow position: chr2:77968186-77968028 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 75

Conread position: 340-556
Cow position: chr2:41417908-41417694 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 23, 77

Conread position: 340-566
Cow position: chr2:7365896-7365673 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 340-578
Cow position: chr2:14037393-14037161 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 59, 122

Conread position: 340-584
Cow position: chr2:13684923-13685154 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 59, 68

Conread position: 340-584
Cow position: chr2:31420318-31420559 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 37, 26

Conread position: 340-584
Cow position: chr2:39411968-39412212 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 54, 124

Conread position: 340-584
Cow position: chr2:43344966-43344722 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 90

Conread position: 340-584
Cow position: chr2:52183277-52183512 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 59, 111

Conread position: 340-584
Cow position: chr2:72599144-72599380 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 40

Conread position: 341-584
Cow position: chr2:19750658-19750894 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 58, 7

Conread position: 341-584
Cow position: chr2:23062590-23062358 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 341-584
Cow position: chr2:62463672-62463428 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 341-584
Cow position: chr2:76055066-76054845 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 12

Conread position: 342-584
Cow position: chr2:12777244-12777012 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 87

Conread position: 344-500
Cow position: chr2:42286169-42286017 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 110

Conread position: 344-584
Cow position: chr2:33791152-33790918 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 99

Conread position: 344-584
Cow position: chr2:56823001-56822769 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 21

Conread position: 345-584
Cow position: chr2:82828045-82827815 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 54, 74

Conread position: 347-574
Cow position: chr2:44983340-44983112 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 52, 115

Conread position: 347-584
Cow position: chr2:13048553-13048771 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 347-584
Cow position: chr2:49441165-49441397 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 21

Conread position: 353-572
Cow position: chr2:3730446-3730660 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 76

Conread position: 370-578
Cow position: chr2:9709817-9710021 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 83

Conread position: 370-584
Cow position: chr2:38805998-38805787 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 75

Conread position: 372-581
Cow position: chr2:19130512-19130709 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 36

Conread position: 373-583
Cow position: chr2:74848213-74848431 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 35

Conread position: 374-578
Cow position: chr2:41490999-41491201 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 79

Conread position: 412-584
Cow position: chr2:53280772-53280946 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 419-583
Cow position: chr2:73205032-73204869 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.