Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 332-578 |
| Cow position: | chr20:7284215-7284456 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 79 |
| Conread position: | 334-553 |
| Cow position: | chr20:21002175-21001966 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 334-581 |
| Cow position: | chr20:5668424-5668172 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 166 |
| Conread position: | 334-582 |
| Cow position: | chr20:13588794-13588549 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 65, 195 |
| Conread position: | 335-553 |
| Cow position: | chr20:30285729-30285942 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 335-581 |
| Cow position: | chr20:13790358-13790601 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 335-581 |
| Cow position: | chr20:14864501-14864264 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 64, 33 |
| Conread position: | 335-584 |
| Cow position: | chr20:3376944-3376698 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 335-584 |
| Cow position: | chr20:20350424-20350187 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 340-584 |
| Cow position: | chr20:15147620-15147387 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 340-584 |
| Cow position: | chr20:22420430-22420195 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 340-584 |
| Cow position: | chr20:23421992-23421755 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 341-564 |
| Cow position: | chr20:27844387-27844617 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 119 |
| Conread position: | 341-578 |
| Cow position: | chr20:887285-887528 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 341-584 |
| Cow position: | chr20:31098077-31098315 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 342-544 |
| Cow position: | chr20:35249220-35249018 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 113 |
| Conread position: | 344-486 |
| Cow position: | chr20:36707092-36706949 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 346-584 |
| Cow position: | chr20:21403547-21403780 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 361-530 |
| Cow position: | chr20:9918864-9919027 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 361-584 |
| Cow position: | chr20:22919765-22919549 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 94 |
| Conread position: | 361-584 |
| Cow position: | chr20:33154587-33154372 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 363-578 |
| Cow position: | chr20:36988203-36987992 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 363-584 |
| Cow position: | chr20:23400675-23400881 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 370-582 |
| Cow position: | chr20:2858743-2858944 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 370-584 |
| Cow position: | chr20:7801729-7801527 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 375-579 |
| Cow position: | chr20:20072147-20071943 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 381-551 |
| Cow position: | chr20:31563570-31563403 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 387-578 |
| Cow position: | chr20:20064240-20064049 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 12, 79 |
| Conread position: | 403-584 |
| Cow position: | chr20:21301036-21300859 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 412-581 |
| Cow position: | chr20:16582845-16582681 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 412-584 |
| Cow position: | chr20:17473153-17472985 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 40 |
Show alignments to all cow chromosomes.