Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 334-584 |
| Cow position: | chr21:17671999-17671759 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 334-584 |
| Cow position: | chr21:45962779-45963025 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 229, 76 |
| Conread position: | 335-500 |
| Cow position: | chr21:25019251-25019403 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 335-579 |
| Cow position: | chr21:26579679-26579923 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 64, 77 |
| Conread position: | 335-584 |
| Cow position: | chr21:6667582-6667816 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 72 |
| Conread position: | 335-584 |
| Cow position: | chr21:45447970-45448208 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 340-569 |
| Cow position: | chr21:15543563-15543337 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 340-584 |
| Cow position: | chr21:12079602-12079837 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 340-584 |
| Cow position: | chr21:22941761-22942000 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 340-584 |
| Cow position: | chr21:39075095-39074857 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 113 |
| Conread position: | 341-526 |
| Cow position: | chr21:16679171-16679353 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 58, 67 |
| Conread position: | 342-544 |
| Cow position: | chr21:5994590-5994395 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 342-583 |
| Cow position: | chr21:1991672-1991902 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 356-583 |
| Cow position: | chr21:42396384-42396606 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 364-584 |
| Cow position: | chr21:37282930-37283138 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 368-545 |
| Cow position: | chr21:9976600-9976774 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 370-584 |
| Cow position: | chr21:23286228-23286021 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 376-584 |
| Cow position: | chr21:30567543-30567346 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 384-567 |
| Cow position: | chr21:12756365-12756545 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 389-569 |
| Cow position: | chr21:23399403-23399578 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 398-584 |
| Cow position: | chr21:6282371-6282545 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 415-584 |
| Cow position: | chr21:26632005-26631837 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 415-584 |
| Cow position: | chr21:27678472-27678639 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 435-584 |
| Cow position: | chr21:28650822-28650969 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 28 |
Show alignments to all cow chromosomes.