Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 325-581 |
| Cow position: | chr23:30691709-30691466 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 74, 11 |
| Conread position: | 334-576 |
| Cow position: | chr23:15147682-15147447 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 335-527 |
| Cow position: | chr23:9546711-9546901 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 335-530 |
| Cow position: | chr23:25409144-25409337 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 335-583 |
| Cow position: | chr23:23917195-23917440 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 335-584 |
| Cow position: | chr23:16479585-16479337 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 335-584 |
| Cow position: | chr23:24400868-24400616 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 187 |
| Conread position: | 338-530 |
| Cow position: | chr23:5258663-5258848 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 29 |
| Conread position: | 341-582 |
| Cow position: | chr23:16171039-16171283 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 35, 122 |
| Conread position: | 342-584 |
| Cow position: | chr23:36674439-36674213 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 342-584 |
| Cow position: | chr23:39069893-39069653 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 349-565 |
| Cow position: | chr23:36484088-36483881 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 353-583 |
| Cow position: | chr23:7571324-7571105 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 94, 46 |
| Conread position: | 355-584 |
| Cow position: | chr23:34514547-34514325 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 149 |
| Conread position: | 361-490 |
| Cow position: | chr23:1250763-1250636 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 371-584 |
| Cow position: | chr23:39822824-39823028 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 374-584 |
| Cow position: | chr23:2330414-2330218 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 376-521 |
| Cow position: | chr23:32869427-32869286 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 376-584 |
| Cow position: | chr23:1682433-1682633 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 383-553 |
| Cow position: | chr23:15694244-15694073 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 389-580 |
| Cow position: | chr23:20023841-20024029 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 393-584 |
| Cow position: | chr23:9425830-9425643 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 6, 66 |
| Conread position: | 394-580 |
| Cow position: | chr23:30127366-30127189 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 398-584 |
| Cow position: | chr23:37036469-37036298 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 400-578 |
| Cow position: | chr23:23285474-23285647 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 15 |
| Conread position: | 408-584 |
| Cow position: | chr23:14572788-14572961 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 408-584 |
| Cow position: | chr23:25078815-25078643 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 454-584 |
| Cow position: | chr23:6963739-6963613 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.