Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 327-554 |
| Cow position: | chr24:19627707-19627934 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 334-584 |
| Cow position: | chr24:6177703-6177941 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 335-558 |
| Cow position: | chr24:21714902-21714684 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 335-558 |
| Cow position: | chr24:41405032-41404814 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 63 |
| Conread position: | 335-583 |
| Cow position: | chr24:30899529-30899281 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 335-584 |
| Cow position: | chr24:14913276-14913038 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 335-584 |
| Cow position: | chr24:17762970-17762728 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 335-584 |
| Cow position: | chr24:32579479-32579714 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 335-584 |
| Cow position: | chr24:42817559-42817805 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 340-510 |
| Cow position: | chr24:38643925-38644094 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 59, 112 |
| Conread position: | 340-544 |
| Cow position: | chr24:22839305-22839088 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 340-568 |
| Cow position: | chr24:31845520-31845294 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 341-576 |
| Cow position: | chr24:9867167-9866937 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 218, 31 |
| Conread position: | 341-584 |
| Cow position: | chr24:17417394-17417627 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 29 |
| Conread position: | 353-557 |
| Cow position: | chr24:36853663-36853863 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 361-581 |
| Cow position: | chr24:620883-621095 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 361-583 |
| Cow position: | chr24:43491386-43491168 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 361-584 |
| Cow position: | chr24:1295942-1295723 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 362-584 |
| Cow position: | chr24:31301357-31301138 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 48 |
| Conread position: | 381-583 |
| Cow position: | chr24:16552664-16552464 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 381-584 |
| Cow position: | chr24:37386027-37385829 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 387-580 |
| Cow position: | chr24:42338731-42338920 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 13 |
| Conread position: | 393-584 |
| Cow position: | chr24:25934910-25935110 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 398-577 |
| Cow position: | chr24:36550711-36550535 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 415-581 |
| Cow position: | chr24:35835661-35835499 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 46 |
Show alignments to all cow chromosomes.