Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 334-582 |
| Cow position: | chr29:34330920-34330666 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 334-584 |
| Cow position: | chr29:7738376-7738132 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 65, 111 |
| Conread position: | 335-493 |
| Cow position: | chr29:21198319-21198171 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 335-581 |
| Cow position: | chr29:35037056-35037289 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 340-584 |
| Cow position: | chr29:794919-795160 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 344-582 |
| Cow position: | chr29:23988822-23989057 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 344-584 |
| Cow position: | chr29:18361351-18361129 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 345-558 |
| Cow position: | chr29:4458924-4459132 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 348-575 |
| Cow position: | chr29:7892632-7892407 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 102 |
| Conread position: | 348-583 |
| Cow position: | chr29:44028128-44028354 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 348-584 |
| Cow position: | chr29:22655603-22655379 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 353-574 |
| Cow position: | chr29:2481015-2480795 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 360-531 |
| Cow position: | chr29:5174330-5174499 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 361-584 |
| Cow position: | chr29:12193510-12193725 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 370-578 |
| Cow position: | chr29:8890906-8890706 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 49 |
| Conread position: | 372-570 |
| Cow position: | chr29:682176-681988 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 372-581 |
| Cow position: | chr29:8906882-8907084 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 375-584 |
| Cow position: | chr29:34392158-34392368 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 383-584 |
| Cow position: | chr29:849444-849644 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 401-533 |
| Cow position: | chr29:24442938-24442808 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 410-569 |
| Cow position: | chr29:30814075-30814233 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 48 |
Show alignments to all cow chromosomes.