Cow genome map

Conread name: rjca18c_c23.y1

Conread position: 313-584
Cow position: chr4:52597266-52596997 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 238, 62

Conread position: 334-584
Cow position: chr4:36759584-36759837 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 126

Conread position: 335-518
Cow position: chr4:24713350-24713166 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 335-530
Cow position: chr4:51905577-51905771 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 64, 115

Conread position: 335-566
Cow position: chr4:58856202-58855976 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 118

Conread position: 335-573
Cow position: chr4:46875195-46874967 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 71

Conread position: 335-573
Cow position: chr4:49741868-49742104 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 111

Conread position: 335-577
Cow position: chr4:25924652-25924419 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 110

Conread position: 335-582
Cow position: chr4:2443587-2443347 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 116, 30

Conread position: 335-584
Cow position: chr4:5784038-5784265 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 335-584
Cow position: chr4:22507073-22506833 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 119

Conread position: 340-571
Cow position: chr4:20925701-20925471 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 125

Conread position: 340-576
Cow position: chr4:21162959-21163193 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 59, 90

Conread position: 340-581
Cow position: chr4:31003045-31002807 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 68

Conread position: 340-584
Cow position: chr4:5188694-5188457 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 59, 21

Conread position: 340-584
Cow position: chr4:6630011-6629779 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 59, 125

Conread position: 340-584
Cow position: chr4:47511339-47511581 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 120

Conread position: 340-584
Cow position: chr4:57565908-57565671 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 114

Conread position: 341-513
Cow position: chr4:32749775-32749956 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 97

Conread position: 341-584
Cow position: chr4:34043306-34043050 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 342-511
Cow position: chr4:27228776-27228952 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 342-584
Cow position: chr4:29067323-29067101 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 111, 51

Conread position: 344-569
Cow position: chr4:68107044-68106827 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 56, 64

Conread position: 345-569
Cow position: chr4:9822470-9822689 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 30

Conread position: 346-574
Cow position: chr4:57652528-57652752 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 62

Conread position: 353-566
Cow position: chr4:54347527-54347738 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 76

Conread position: 353-584
Cow position: chr4:5886664-5886886 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 46, 99

Conread position: 354-582
Cow position: chr4:31586273-31586056 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 62

Conread position: 355-584
Cow position: chr4:58432642-58432414 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 31

Conread position: 360-580
Cow position: chr4:4519484-4519696 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 39, 56

Conread position: 361-497
Cow position: chr4:1059348-1059216 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 59

Conread position: 361-584
Cow position: chr4:57221889-57221665 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 9

Conread position: 362-577
Cow position: chr4:4192534-4192741 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 45

Conread position: 363-573
Cow position: chr4:9089746-9089538 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 98

Conread position: 372-584
Cow position: chr4:9128082-9128299 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 81, 128

Conread position: 384-584
Cow position: chr4:15046234-15046434 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 75

Conread position: 390-582
Cow position: chr4:59809589-59809411 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 117

Conread position: 393-569
Cow position: chr4:49881627-49881451 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 142

Conread position: 393-584
Cow position: chr4:4029192-4029382 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 6, 36

Conread position: 398-583
Cow position: chr4:27444417-27444600 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 137

Show alignments to all cow chromosomes.