Cow genome map


           Conread name:
           rjca18c_c23.y1
        

               Conread position:
               326-578
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               182, 27
               

               Conread position:
               334-572
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               335-456
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               335-493
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               335-544
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               113, 62
               

               Conread position:
               335-555
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               335-569
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               335-569
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               179, 54
               

               Conread position:
               335-577
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               335-578
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               335-579
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               134, 158
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 73
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               335-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 162
               

               Conread position:
               338-579
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 70
               

               Conread position:
               340-486
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               340-513
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               340-558
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               340-558
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 68
               

               Conread position:
               340-566
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               340-569
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               340-579
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 71
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 108
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               111, 49
               

               Conread position:
               340-584
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               342-574
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 133
               

               Conread position:
               343-567
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               168, 65
               

               Conread position:
               343-580
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               60, 104
               

               Conread position:
               347-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               347-584
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               53, 82
               

               Conread position:
               348-584
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 81
               

               Conread position:
               348-584
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               51, 162
               

               Conread position:
               355-582
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               363-584
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               364-584
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               31, 94
               

               Conread position:
               370-579
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               370-584
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 158
               

               Conread position:
               370-584
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               372-572
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 164
               

               Conread position:
               372-578
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 126
               

               Conread position:
               372-584
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               373-582
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               375-583
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               398-569
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               398-581
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               398-584
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               408-584
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               410-578
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               415-578
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               455-584
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.