Cow genome map
| Conread name: | rjca18c_c23.y1 |
| Conread position: | 335-553 |
| Cow position: | chr8:5874472-5874682 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 64, 73 |
| Conread position: | 335-558 |
| Cow position: | chr8:30021598-30021379 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 335-558 |
| Cow position: | chr8:42151674-42151463 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 79 |
| Conread position: | 335-571 |
| Cow position: | chr8:53891857-53892088 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 335-577 |
| Cow position: | chr8:40273317-40273078 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 335-579 |
| Cow position: | chr8:18725541-18725772 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 56 |
| Conread position: | 335-581 |
| Cow position: | chr8:6763955-6763715 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 335-583 |
| Cow position: | chr8:2974992-2975237 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 335-583 |
| Cow position: | chr8:4336735-4336491 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 64, 120 |
| Conread position: | 335-583 |
| Cow position: | chr8:22102868-22102620 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 142 |
| Conread position: | 335-583 |
| Cow position: | chr8:53359635-53359387 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 335-584 |
| Cow position: | chr8:8480334-8480078 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 335-584 |
| Cow position: | chr8:14617570-14617327 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 335-584 |
| Cow position: | chr8:18801562-18801802 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 119 |
| Conread position: | 335-584 |
| Cow position: | chr8:18883149-18883397 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 64, 105 |
| Conread position: | 335-584 |
| Cow position: | chr8:48682171-48681920 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 335-584 |
| Cow position: | chr8:54159063-54159310 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 337-584 |
| Cow position: | chr8:40432540-40432298 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 340-574 |
| Cow position: | chr8:28387448-28387220 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 340-578 |
| Cow position: | chr8:23440776-23440547 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 340-580 |
| Cow position: | chr8:7104079-7103849 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 340-584 |
| Cow position: | chr8:19772807-19773040 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 76 |
| Conread position: | 340-584 |
| Cow position: | chr8:19793386-19793150 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 114 |
| Conread position: | 341-578 |
| Cow position: | chr8:9672208-9672444 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 58, 180 |
| Conread position: | 341-582 |
| Cow position: | chr8:33818902-33818671 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 58, 88 |
| Conread position: | 341-584 |
| Cow position: | chr8:57404373-57404626 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 18 |
| Conread position: | 344-530 |
| Cow position: | chr8:54828575-54828756 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 344-582 |
| Cow position: | chr8:6507947-6507707 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 354-575 |
| Cow position: | chr8:19369161-19368954 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 360-583 |
| Cow position: | chr8:31185587-31185807 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 361-584 |
| Cow position: | chr8:10167188-10167395 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 383-533 |
| Cow position: | chr8:26041009-26040865 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 402-581 |
| Cow position: | chr8:5803569-5803752 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 408-584 |
| Cow position: | chr8:32960200-32960035 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 410-584 |
| Cow position: | chr8:9986183-9986362 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 415-578 |
| Cow position: | chr8:7102488-7102649 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 415-584 |
| Cow position: | chr8:32327297-32327464 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 35, 13 |
Show alignments to all cow chromosomes.